Detailed Information for Phage Crocheter |
Discovery Information |
Isolation Host | Gordonia rubripertincta NRRL B-16540 |
Found By | Ashley Divens |
Year Found | 2018 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Phage Hunters Integrating Research and Education |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 40.4435 N, 79.9548 W Map |
Naming Notes | I am an avid crocheter, therefore gave this phage the name "Crocheter". |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jul 20, 2018 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 794 |
Genome length (bp) | 60531 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 9 bases |
Overhang Sequence | CGCCGCTCT |
GC Content | 51.6% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | DJ |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | University of Pittsburgh |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 91 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MN585996 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
96 |
Pitt Freezer Box Grid# |
E10 |
Available Files |
EM Picture | Download |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |