The Actinobacteriophage Database

Add or modify phage thumbnail images to appear at the top of this page.

Know something about this phage that we don't? Modify its data.

Detailed Information for Phage DocB7
Discovery Information
Isolation Host	Rhodococcus equi HDP1C
Former names	ReqiDocB7
Found By	E.J. Summer et al
Year Found	2010
Location Found	Unavailable
Program	Unavailable
From enriched soil sample?	Yes
Isolation Temperature	Not entered
GPS Coordinates	30.618994 N, 96.335416 W Map
Sequencing Information
Sequencing Complete?	Yes
Date Sequencing Completed	Jan 13, 2011
Shotgun Sequencing Method	454
Sequencer Used	454 Genome Sequencer FLX
Approximate Shotgun Coverage	23
Genome length (bp)	75772
Character of genome ends	Circularly Permuted
GC Content	56.7%
Fasta file available?	Yes: Download fasta file
Characterization
Cluster	Singleton
Subcluster	--
Cluster Life Cycle	Unknown
Other Cluster Members	Click to View ArV2 Attoomi Ball Barebow Cantare ChewyVIII Chymera DillyDally DocB7 DS6A E3 Elener EmiRose ERHickory Eyre Finch Finkle Footloose FuzzBuster GAL1 Gilgamesh GMA1 GMA4 Gudmit Ibantik Jace JeanGrey Juicebox Kithara Kromp Kumao LilSpotty LuckyBarnes Lukepolites Magritte Min1 MooMoo mu16 OnionKnight P3MA PensacolaC28 phiAsp2 phiSAV Phroglets Pine5 Ponzi pZL12 REQ2 REQ3 Reynauld Root RRH1 Samy Shambre1 Shocker Shrew Sleepyhead Spartoi Sunfish TinyDot TJE1 Tonitrus TPA2 TPA4 Trogglehumper TurkishDelight ValentiniPuff Whack Wollypog Yappy
Annotating Institution	Unknown or unassigned
Annotation Status	In GenBank
Number of Genes	105
Number of tRNAs	0
Number of tmRNAs	0
Has been Phamerated?	Yes
Gene List	Click to View DocB7_001 DocB7_002 DocB7_003 (TerL) DocB7_004 (Mu gp29-like protein) DocB7_005 DocB7_006 DocB7_007 DocB7_008 DocB7_009 DocB7_010 DocB7_011 DocB7_012 DocB7_013 DocB7_014 DocB7_015 DocB7_016 DocB7_017 DocB7_018 DocB7_019 DocB7_021 (pre-TMP frameshift protein) DocB7_020 (truncated pre-TMP frameshift protein) DocB7_022 (tape measure protein) DocB7_023 DocB7_024 DocB7_025 DocB7_026 (putative holin) DocB7_027 (LysA) DocB7_028 (holin) DocB7_029 DocB7_030 (holin) DocB7_031 DocB7_032 DocB7_033 DocB7_034 (WhiB) DocB7_035 DocB7_036 (DNA methylase) DocB7_037 DocB7_038 (LysB) DocB7_039 DocB7_040 DocB7_041 DocB7_042 DocB7_043 DocB7_044 (DnaN) DocB7_045 (oligoribonuclease) DocB7_046 DocB7_047 DocB7_048 (helicase) DocB7_049 DocB7_050 DocB7_051 DocB7_052 DocB7_053 DocB7_054 (HNH endonuclease) DocB7_055 DocB7_056 DocB7_057 DocB7_058 DocB7_059 (tyrosine recombinase/integrase) DocB7_060 DocB7_061 DocB7_062 DocB7_063 DocB7_064 DocB7_065 DocB7_066 DocB7_067 DocB7_068 (vWFA) DocB7_069 (AAA protein) DocB7_070 DocB7_071 DocB7_072 DocB7_073 DocB7_074 DocB7_075 DocB7_076 DocB7_077 DocB7_078 DocB7_079 DocB7_080 DocB7_081 DocB7_082 DocB7_083 DocB7_084 DocB7_085 DocB7_086 DocB7_087 DocB7_088 DocB7_089 DocB7_090 DocB7_091 DocB7_092 DocB7_093 DocB7_094 DocB7_095 DocB7_096 DocB7_097 DocB7_098 DocB7_099 DocB7_100 DocB7_101 DocB7_102 DocB7_103 DocB7_104 DocB7_105
Publication Info
Uploaded to GenBank?	Yes
GenBank Accession	GU580940
Refseq Number	NC_023706
Published in Paper	E. J. Summer et al 2011, Applied and Environmental Microbiology: Genomic and Functional Analyses of Rhodococcus equi Phages ReqiPepy6, ReqiPoco6, ReqiPine5, and ReqiDocB7
Archiving Info
Archiving status	Ignore

Click to View

Click to View