| Detailed Information for Phage Finch |
| Discovery Information |
| Isolation Host | Rhodococcus erythropolis RIA 643 |
| Found By | Krista Haglund |
| Year Found | 2016 |
| Location Found | Clam Falls, WI USA |
| Finding Institution | University of Wisconsin-River Falls |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 45.0 N, 92.0 W Map |
| Discovery Notes | This soil was collected from a soy bean field in Frederic, Wisconsin. The soil was moist, loose, sandy, and the top layer had a layer of moss. The soil depth was 38 mm deep. It was collected on September 10, 2016. We do not believe that we are part of a cluster because we did not receive results from the PCR gel. |
| Naming Notes | Originally we wanted to name the phage AtticusFinch from the book to Kill a Mocking Bird, but the name was copyrighted so we shortened it to Finch. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 23, 2017 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 847 |
| Genome length (bp) | 138896 |
| Character of genome ends | Circularly Permuted |
| GC Content | 63.1% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | Singleton |
| Subcluster | -- |
| Cluster Life Cycle | Unknown |
| Other Cluster Members |
|
| Annotating Institution | University of Wisconsin-River Falls |
| Annotation Status | In GenBank |
| Plaque Notes | The plaques were extremely small so we were unable to measure the size. But they were smaller than the period at the end of this sentence. The plaques were round, uniform, and clear. |
| Morphotype | Myoviridae |
| Number of Genes | 228 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MG962366 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| SEA Lysate Titer |
6 x 10^9 |
| Pitt Freezer Box# |
37 |
| Pitt Freezer Box Grid# |
E12 |
| Available Files |
| EM Picture | Download |
| GenBank File for Phamerator | Download |