Detailed Information for Phage Ibantik |
Discovery Information |
Isolation Host | Streptomyces lividans JI 1326 |
Former names | Local458 |
Found By | Kaitlyn Brown |
Year Found | 2012 |
Location Found | Pringle, PA USA |
Finding Institution | Wilkes University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | Not entered |
GPS Coordinates | 41.27425 N, 75.90268 W Map |
Discovery Notes | Isolated directly from composted grass clippings |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Nov 3, 2014 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 486 |
Genome length (bp) | 56362 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | CGCCGGGGGCA |
End Determination Notes | Buildups of reads were observed in the Illumina sequencing data. |
GC Content | 57.4% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | Singleton |
Subcluster | -- |
Cluster Life Cycle | Unknown |
Other Cluster Members |
|
Annotating Institution | Wilkes University |
Annotation Status | In GenBank |
Plaque Notes | Mostly clear, with distinct lysogen colonies, up to 5 mm diameter. |
Number of Genes | 105 |
Number of tRNAs | 2 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MH155870 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
124 |
Pitt Freezer Box Grid# |
D12 |
Available Files |
Plaque Picture | Download |
GenBank File for Phamerator | Download |