Mycobacterium phage Redno2
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| Detailed Information for Phage Redno2 | |
| Discovery Information | |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Azhar Bashir |
| Year Found | 2011 |
| Location Found | Richmond, VA USA |
| Finding Institution | Virginia Commonwealth University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | Not entered |
| GPS Coordinates | 37.555833 N, 77.643611 W Map |
| Discovery Notes | Near garden tomato plant by James River in Richmond, VA |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Feb 21, 2012 |
| Sequencing Facility | Virginia Commonwealth University Nucleic Acids Research Facilities |
| Shotgun Sequencing Method | 454 |
| Sequencer Used | 454 Genome Sequencer FLX |
| Approximate Shotgun Coverage | 114 |
| Genome length (bp) | 108297 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 4 bases |
| Overhang Sequence | ATCC |
| GC Content | 60.9% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | J |
| Subcluster | -- |
| Cluster Life Cycle | Temperate |
| Other Cluster Members | |
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Plaque Notes | 1 mm, clear |
| Morphotype | Siphoviridae |
| Number of Genes | 231 |
| Number of tRNAs | 1 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List | |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | KF114875 |
| Refseq Number | NC_022066 |
| Published in Paper | Pope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity |
| Archiving Info | |
| Archiving status | Archived |
| SEA Designator | 2011VACURedno2ASB |
| SEA Lysate Titer | 3.8e7 |
| Date of SEA Lysate Titering | Oct 19, 2011 |
| Pitt Freezer Box# | 30 |
| Pitt Freezer Box Grid# | 45 |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
