Rhodococcus phage Reynauld
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Detailed Information for Phage Reynauld | |
Discovery Information | |
Isolation Host | Rhodococcus equi NRRL B-16538 |
Found By | Calvin Ritzema |
Year Found | 2022 |
Location Found | Grand Rapids, MI United States of America |
Finding Institution | Calvin University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 42.893611 N, 85.738611 W Map |
Discovery Notes | Reynauld was adopted from Prof Wertz. He found it in the back corner of his yard where he said he had buried a dead rabbit about 3 years ago. He described the soil as being dry and “loamy” – a mixture of clay, sand, and humus. Collected early morning, about 65 degrees and cloudy. |
Naming Notes | I was playing a video game called Darkest Dungeon and there was a character named Reynauld. So I named it Reynauld. |
Sequencing Information | |
Sequencing Complete? | Yes |
Date Sequencing Completed | Mar 14, 2023 |
Sequencing Facility | NC State Genomic Sciences Laboratory |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 3099 |
Genome length (bp) | 80980 |
Character of genome ends | Direct Terminal Repeat |
Direct Terminal Repeat Length | 362 bp |
GC Content | 66.5% |
Fasta file available? | Yes: Download fasta file |
Characterization | |
Cluster | Singleton |
Subcluster | -- |
Cluster Life Cycle | Unknown |
Other Cluster Members | |
Annotating Institution | Calvin University |
Annotation Status | In GenBank |
Plaque Notes | Small pencil tip size. Clear and stretched out at the edges. Size approximately 2mm each. |
Morphotype | Siphoviridae |
Number of Genes | 103 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List | |
Submitted Minimal DNA Master File | Download |
Publication Info | |
Uploaded to GenBank? | Yes |
GenBank Accession | OR159659 |
Refseq Number | None yet |
Archiving Info | |
Archiving status | Archived |
Pitt Freezer Box# | 162 |
Pitt Freezer Box Grid# | F6 |
Available Files | |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |