Microbacterium phage Shocker
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| Detailed Information for Phage Shocker | |
| Discovery Information | |
| Isolation Host | Microbacterium paraoxydans NRRL B-14843 |
| Found By | James Vang |
| Year Found | 2019 |
| Location Found | Oakdale, MN United States |
| Finding Institution | University of Wisconsin-River Falls |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 28°C |
| GPS Coordinates | 45.025833 N, 92.981 W Map |
| Discovery Notes | The soil sample for this soil is moist, and the depth of the soil was 50.8 mm deep. The weather condition was raining and got collected at 3:00 pm. It was also collected in the backyard of my house. |
| Naming Notes | I was shocked at how many times I had to repeat the procedures. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | May 8, 2020 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 121 |
| Genome length (bp) | 45431 |
| Character of genome ends | Direct Terminal Repeat |
| Direct Terminal Repeat Length | 484 bp |
| GC Content | 63.0% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | Singleton |
| Subcluster | -- |
| Cluster Life Cycle | Unknown |
| Other Cluster Members | |
| Annotating Institution | University of Wisconsin-River Falls |
| Annotation Status | In GenBank |
| Morphotype | Podoviridae |
| Number of Genes | 66 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List | |
| Submitted Minimal DNA Master File | Download |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MW507126 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 102 |
| Pitt Freezer Box Grid# | H5 |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
