Curtobacterium phage Yappy
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Detailed Information for Phage Yappy
Discovery Information
Isolation HostCurtobacterium flaccumfaciens NRRL B-59340
Found BySerena Slatas
Year Found2024
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates40.42577 N, 79.99705 W Map
Discovery NotesI collected this dirt by a tree stump on Mt Washington on 5/14. The plaque picture was taken after 48 hours of incubation.
Annotated by Megan Magee.
Naming NotesMy friends and I love to yap.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedOct 1, 2024
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage1835
Genome length (bp)68074
Character of genome endsDirect Terminal Repeat
Overhang Length1602 bases
GC Content56.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterSingleton
Subcluster--
Cluster Life CycleUnknown
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Number of Genes118
Number of tRNAs24
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Yappy_1

Yappy_2

Yappy_3

Yappy_4

Yappy_5

Yappy_6

Yappy_7

Yappy_8

Yappy_9

Yappy_10

Yappy_11

Yappy_12

Yappy_13

Yappy_14

Yappy_15

Yappy_16

Yappy_17

Yappy_18

Yappy_19

Yappy_20

Yappy_21

Yappy_22

Yappy_23

Yappy_24 — tRNA
(tRNA-Asn(gtt))

Yappy_25 — tRNA
(tRNA-Trp(cca))

Yappy_26 — tRNA
(tRNA-Ala(tgc))

Yappy_27 — tRNA
(tRNA-Met(cat))

Yappy_28 — tRNA
(tRNA-Pro(tgg))

Yappy_29 — tRNA
(tRNA-His(gtg))

Yappy_30 — tRNA
(tRNA-Asp(gtc))

Yappy_31 — tRNA
(tRNA-Glu(ctc))

Yappy_32 — tRNA
(tRNA-Glu(ttc))

Yappy_33 — tRNA
(tRNA-Tyr(gta))

Yappy_34 — tRNA
(tRNA-Phe(gaa))

Yappy_35 — tRNA
(tRNA-Leu(tag))

Yappy_36 — tRNA
(tRNA-Ser(aga))

Yappy_37 — tRNA
(tRNA-Ser(gct))

Yappy_38 — tRNA
(tRNA-Lys(ctt))

Yappy_39 — tRNA
(tRNA-Gly(tcc))

Yappy_40 — tRNA
(tRNA-Thr(tgt))

Yappy_41 — tRNA
(tRNA-Val(tac))

Yappy_42 — tRNA
(tRNA-Arg(acg))

Yappy_43 — tRNA
(tRNA-Gln(ctg))

Yappy_44 — tRNA
(tRNA-Cys(gca))

Yappy_45 — tRNA
(tRNA-Arg(tct))

Yappy_46 — tRNA
(tRNA-Ile(gat))

Yappy_47

Yappy_48

Yappy_49
(minor tail protein)

Yappy_50
(NrdH-like glutaredoxin)

Yappy_51

Yappy_52

Yappy_53
(terminase)

Yappy_54
(portal protein)

Yappy_55
(capsid maturation protease)

Yappy_56

Yappy_57
(major capsid protein)

Yappy_58

Yappy_59

Yappy_60
(head-to-tail adaptor)

Yappy_61

Yappy_62

Yappy_63

Yappy_64
(major tail protein)

Yappy_65
(tail assembly chaperone)

Yappy_66

Yappy_67
(tape measure protein)

Yappy_68
(minor tail protein)

Yappy_69
(minor tail protein)

Yappy_70

Yappy_71

Yappy_72
(endolysin)

Yappy_73

Yappy_74

Yappy_75

Yappy_76
(metallophosphatase)

Yappy_77
(RuvC-like resolvase)

Yappy_78

Yappy_79

Yappy_80
(DNA polymerase I)

Yappy_81

Yappy_82
(DNA binding protein)

Yappy_83
(DNA primase)

Yappy_84 — tRNA
(tRNA-Leu(caa))

Yappy_85

Yappy_86
(ASCE ATPase)

Yappy_87
(Cas4 family exonuclease)

Yappy_88

Yappy_89

Yappy_90

Yappy_91

Yappy_92

Yappy_93

Yappy_94

Yappy_95

Yappy_96
(ASCE ATPase)

Yappy_97

Yappy_98
(RNA ligase)

Yappy_99
(polynucleotide kinase)

Yappy_100

Yappy_101

Yappy_102

Yappy_103

Yappy_104

Yappy_105

Yappy_106

Yappy_107

Yappy_108

Yappy_109

Yappy_110

Yappy_111

Yappy_112

Yappy_113

Yappy_114

Yappy_115

Yappy_116

Yappy_117

Yappy_118

Yappy_119

Yappy_120

Yappy_121

Yappy_122

Yappy_123

Yappy_124

Yappy_125
(Lsr2-like DNA bridging protein)

Yappy_126

Yappy_127

Yappy_128

Yappy_129

Yappy_130

Yappy_131

Yappy_132

Yappy_133

Yappy_134

Yappy_135

Yappy_136

Yappy_137

Yappy_138

Yappy_139
(antirestriction protein, ArdA-like)

Yappy_140

Yappy_141

Yappy_142

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPQ868972
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
GenBank File for PhameratorDownload