Gordonia phage Denise
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Detailed Information for Phage Denise
Discovery Information
Isolation HostGordonia terrae 3612
Found ByRebecca Oberschmidt
Year Found2017
Location FoundPittsburgh, PA United States of America
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.445724 N, 79.962791 W Map
Discovery NotesThe sample was transported for approximately two hours in cool, dry location. The collection location was removed from foot traffic although there was nearby vegetation. The weather conditions were very cold so the soil was essentially frozen
Naming NotesThe phage was named after my mom.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 19, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1210
Genome length (bp)45043
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceTACCAGGGGGA
GC Content65.4%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCZ
SubclusterCZ5
Cluster Life CycleTemperate
Other Cluster Members
Annotation StatusOverdue (Expected completion by 5/15/2018)
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 55
Pitt Freezer Box Grid# E9
Available Files
Plaque PictureDownload
EM PictureDownload