Gordonia phage Zirinka
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Detailed Information for Phage Zirinka
Discovery Information
Isolation HostGordonia terrae 3612
Duplicates of this PhageShenfang, Snisky
Found ByAleks Brown
Year Found2015
Location FoundLigonier, PA, PA United States
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates40.242006 N, 79.234299 W Map
Naming NotesUkrainian word for star
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 10, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage2884
Genome length (bp)52077
Character of genome ends3' Sticky Overhang
Overhang Length10 bp
Overhang SequenceCGGCTGGGGA
GC Content66.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCZ
Subcluster--
Other Cluster Members
MorphotypeSiphoviridae
Final annotation complete?Yes
Number of Genes79
Has been Phamerated?Yes
Gene List

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Zirinka_1
(Terminase, small subunit)

Zirinka_2
(terminase, large subunit)

Zirinka_3

Zirinka_4
(portal protein)

Zirinka_5
(capsid maturation protease)

Zirinka_6
(major capsid protein)

Zirinka_7
(head-to-tail connector)

Zirinka_8
(head-to-tail connector)

Zirinka_9
(head-to-tail connector)

Zirinka_10

Zirinka_11
(head-to-tail connector)

Zirinka_12
(major tail protein)

Zirinka_13

Zirinka_14
(tail assembly chaperone)

Zirinka_15
(tail assembly chaperone)

Zirinka_16

Zirinka_17
(tape measure protein)

Zirinka_18
(minor tail protein)

Zirinka_19
(minor tail protein)

Zirinka_20
(Lysin A, L-ala D-glu peptidase domain)

Zirinka_21
(Lysin A, peptidase domain)

Zirinka_22
(membrane protein)

Zirinka_23
(membrane protein)

Zirinka_24
(membrane protein)

Zirinka_25
(Lysin B)

Zirinka_26
(minor tail protein)

Zirinka_27

Zirinka_28
(minor tail protein)

Zirinka_29

Zirinka_30

Zirinka_31

Zirinka_32

Zirinka_33

Zirinka_34
(Toxin, toxin-antitoxin system)

Zirinka_35

Zirinka_36
(Integrase (Y-int))

Zirinka_37

Zirinka_38

Zirinka_39

Zirinka_40

Zirinka_41
(immunity repressor)

Zirinka_42
(HTH DNA binding domain)

Zirinka_43

Zirinka_44

Zirinka_45
(antirepressor)

Zirinka_46

Zirinka_47

Zirinka_48

Zirinka_49

Zirinka_50

Zirinka_51

Zirinka_52

Zirinka_53
(RecE exonuclease)

Zirinka_54
(RecT ssDNA binding protein)

Zirinka_55

Zirinka_56

Zirinka_57

Zirinka_58
(ASC-1 superfamily)

Zirinka_59

Zirinka_60
(DNA Methylase)

Zirinka_61

Zirinka_62

Zirinka_63

Zirinka_64

Zirinka_65

Zirinka_66

Zirinka_67

Zirinka_68

Zirinka_69
(RusA resolvase)

Zirinka_70

Zirinka_71

Zirinka_72

Zirinka_73

Zirinka_74
(HTH DNA binding domain)

Zirinka_75

Zirinka_76

Zirinka_77

Zirinka_78

Zirinka_79
(HNH endonuclease)

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKX557287
Refseq NumberNone yet
Available Files
Final DNAMaster FileDownload