Gordonia phage Yeet412
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage Yeet412
Discovery Information
Isolation HostGordonia terrae 3612
Found ByLogan Timar, Taylor Ryder, Emma Gray, Sila Basbay
Year Found2020
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.437667 N, 79.962438 W Map
Discovery NotesThe soil was found outside in a concrete flower box near SyVue Apartments in Pittsburgh, Pennsylvania. The soil was dry and had large mineral deposits with sandy loam. It was collected on a warm, rainy day (8/25/2020). There was no direct sunlight on the sample.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 11, 2021
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage155
Genome length (bp)46684
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceTACCAGGGGGA
GC Content66.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCZ
SubclusterCZ2
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Has been Phamerated?Yes
Gene List

Click to View

Yeet412_1
(terminase small subunit)

Yeet412_2
(terminase large subunit)

Yeet412_3
(portal protein)

Yeet412_4
(capsid maturation protease)

Yeet412_5
(scaffolding protein)

Yeet412_6
(major capsid protein)

Yeet412_7

Yeet412_8
(head-to-tail adaptor)

Yeet412_9
(head-to-tail stopper)

Yeet412_10
(minor capsid protein)

Yeet412_11
(tail terminator)

Yeet412_12
(major tail protein)

Yeet412_13
(tail assembly chaperone)

Yeet412_14
(tail assembly chaperone)

Yeet412_15
(tape measure protein)

Yeet412_16
(minor tail protein)

Yeet412_17
(minor tail protein)

Yeet412_18
(lysin A)

Yeet412_19

Yeet412_20

Yeet412_21

Yeet412_22

Yeet412_23

Yeet412_24
(lysin B)

Yeet412_25
(minor tail protein)

Yeet412_26

Yeet412_27

Yeet412_28
(minor tail protein)

Yeet412_29

Yeet412_30

Yeet412_31

Yeet412_32
(toxin)

Yeet412_33
(lipoprotein)

Yeet412_34
(tyrosine integrase)

Yeet412_35

Yeet412_36
(antitoxin)

Yeet412_37
(helix-turn-helix DNA-binding domain protein)

Yeet412_38
(helix-turn-helix DNA-binding domain protein)

Yeet412_39
(immunity repressor)

Yeet412_40
(helix-turn-helix DNA-binding domain protein)

Yeet412_41

Yeet412_42

Yeet412_43
(antirepressor)

Yeet412_44

Yeet412_45

Yeet412_46

Yeet412_47

Yeet412_48

Yeet412_49

Yeet412_50

Yeet412_51
(RecB-like exonuclease/helicase)

Yeet412_52
(RecT-like ssDNA binding protein)

Yeet412_53

Yeet412_54

Yeet412_55

Yeet412_56

Yeet412_57

Yeet412_58
(DNA methylase)

Yeet412_59

Yeet412_60

Yeet412_61

Yeet412_62

Yeet412_63

Yeet412_64

Yeet412_65

Yeet412_66

Yeet412_67
(RusA-like resolvase)

Yeet412_68

Yeet412_69

Yeet412_70

Yeet412_71

Yeet412_72

Yeet412_73
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMZ150788
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 126
Pitt Freezer Box Grid# E1
Available Files
Plaque PictureDownload
GenBank File for PhameratorDownload