| Detailed Information for Phage Albedo |
| Discovery Information |
| Isolation Host | Microbacterium foliorum NRRL B-24224 |
| Found By | Hailey Pucillo |
| Year Found | 2021 |
| Location Found | Hudson, WI USA |
| Finding Institution | University of Wisconsin-River Falls |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 29°C |
| GPS Coordinates | 44.984533 N, 92.7545 W Map |
| Discovery Notes | Albedo was adopted from Karen Klyczeck.
The sample was collected on 9/8/2021 at 7:00 AM. The weather was dry, sunny with a slight breeze, and it was 63°F. The depth of collection was 5 cm and was collected from a compost pile. The soil the sample was collected from was semi-moist and full of partially degraded leaves and grass, and the site had many earthworms present. |
| Naming Notes | Named after the video game character Albedo from Genshin Impact. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Mar 23, 2022 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 83 |
| Genome length (bp) | 41813 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | TCTCCCGGCA |
| GC Content | 66.6% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | EB |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Cabrini University |
| Annotation Status | In GenBank |
| Plaque Notes | The size of Albedo is variable and ranges from 0.1 mm to 1 mm. Albedo is clear with a noticeable halo (though that halo was absent after a lysate titer was performed). |
| Morphotype | Siphoviridae |
| Number of Genes | 70 |
| Number of tRNAs | 1 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | OR475283 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
140 |
| Pitt Freezer Box Grid# |
B2 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
