Detailed Information for Phage Arroyo |
Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Virology Course |
Year Found | 2017 |
Location Found | Choctaw, OK USA |
Finding Institution | University of Central Oklahoma |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 35.448056 N, 97.288889 W Map |
Discovery Notes | Katie Chalifoux, Jessica Mejia, Carina Gutierrez and Hari Kotturi |
Naming Notes | The name Arroyo was chosen because it is the Spanish word for a dry creek that seasonally fills and flows after sufficient rain. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Sep 27, 2018 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 1225 |
Genome length (bp) | 42129 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | TCTCCCGGCA |
GC Content | 66.6% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EB |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | University of Central Oklahoma |
Annotation Status | In GenBank |
Plaque Notes | The virus forms clear plaques with cloudy halo. Plaques are around 4mm in diameter. |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MK937610 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
167 |
Pitt Freezer Box Grid# |
A3 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |