Microbacterium phage BubbaBear
BubbaBear Plaque Picture
BubbaBear EM Picture
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Detailed Information for Phage BubbaBear
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224 SEA
Found ByEvelyn Ary
Year Found2018
Location FoundManhattan, KS USA
Finding InstitutionKansas State University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature13°C
GPS Coordinates39.195682 N, 96.575696 W Map
Discovery NotesSample found near garbage and building, soil was rocky and wet from rain the previous night. Soil taken from an inch below the surface. Outside temperature was 12.78°C.
Naming NotesThis name is in honor of my dog Bear (05/2003-09/22/2018) who was a great dog and survived through many medical emergencies and inspired me to become a vet.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 29, 2019
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage58
Genome length (bp)41814
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTCTCCCGGCA
GC Content66.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEB
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotation StatusIn GenBank
Has been Phamerated?Yes
Gene List

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BubbaBear_1

BubbaBear_1

BubbaBear_2
(terminase, small subunit)

BubbaBear_2

BubbaBear_3
(terminase, large subunit)

BubbaBear_3

BubbaBear_4
(portal protein)

BubbaBear_4

BubbaBear_5
(capsid maturation protease)

BubbaBear_5

BubbaBear_6
(major capsid protein)

BubbaBear_6

BubbaBear_7

BubbaBear_7

BubbaBear_8
(head-to-tail adaptor)

BubbaBear_8

BubbaBear_9
(head-to-tail stopper)

BubbaBear_9

BubbaBear_10

BubbaBear_10

BubbaBear_11
(tail terminator)

BubbaBear_11

BubbaBear_12
(major tail protein)

BubbaBear_12

BubbaBear_13
(tail assembly chaperone)

BubbaBear_14
(tail assembly chaperone)

BubbaBear_13

BubbaBear_14

BubbaBear_15

BubbaBear_15

BubbaBear_16
(tape measure protein)

BubbaBear_16

BubbaBear_17
(minor tail protein)

BubbaBear_17

BubbaBear_18
(minor tail protein)

BubbaBear_18

BubbaBear_19

BubbaBear_19

BubbaBear_20
(minor tail protein)

BubbaBear_20

BubbaBear_21
(minor tail protein)

BubbaBear_21

BubbaBear_22
(lysin A)

BubbaBear_22

BubbaBear_23
(membrane protein)

BubbaBear_23

BubbaBear_24

BubbaBear_24

BubbaBear_25
(membrane protein)

BubbaBear_25

BubbaBear_26

BubbaBear_26

BubbaBear_27

BubbaBear_27

BubbaBear_28

BubbaBear_28

BubbaBear_29
(exonuclease)

BubbaBear_29

BubbaBear_30

BubbaBear_30

BubbaBear_31
(phosphatase)

BubbaBear_31

BubbaBear_32
(thymidylate kinase)

BubbaBear_32

BubbaBear_33

BubbaBear_33

BubbaBear_34

BubbaBear_34

BubbaBear_35
(thioredoxin)

BubbaBear_35

BubbaBear_36
(RusA-like resolvase (endonuclease))

BubbaBear_36

BubbaBear_37

BubbaBear_37

BubbaBear_38

BubbaBear_38

BubbaBear_39

BubbaBear_39

BubbaBear_40
(DNA primase)

BubbaBear_40

BubbaBear_41
(DNA polymerase I)

BubbaBear_41

BubbaBear_42

BubbaBear_42

BubbaBear_43

BubbaBear_43

BubbaBear_44

BubbaBear_44
(helix-turn-helix DNA binding domain)

BubbaBear_45

BubbaBear_45

BubbaBear_46

BubbaBear_46

BubbaBear_47

BubbaBear_47

BubbaBear_48

BubbaBear_48

BubbaBear_49

BubbaBear_49

BubbaBear_50

BubbaBear_50

BubbaBear_51

BubbaBear_51

BubbaBear_52

BubbaBear_52

BubbaBear_53

BubbaBear_53

BubbaBear_54

BubbaBear_54

BubbaBear_55

BubbaBear_55

BubbaBear_56
(dihydrofolate reductase)

BubbaBear_56

BubbaBear_57

BubbaBear_57

BubbaBear_58

BubbaBear_58

BubbaBear_59
(thymidylate synthase)

BubbaBear_59

BubbaBear_60

BubbaBear_60

BubbaBear_61

BubbaBear_61

BubbaBear_62

BubbaBear_62

BubbaBear_63

BubbaBear_63

BubbaBear_64

BubbaBear_64

BubbaBear_65

BubbaBear_65

BubbaBear_66

BubbaBear_66

BubbaBear_67

BubbaBear_68
(HNH endonuclease)

BubbaBear_69

BubbaBear_69

BubbaBear_70

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK814753
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 1x10^-9
Pitt Freezer Box# 80
Pitt Freezer Box Grid# F3
Available Files
GenBank File for PhameratorDownload