Detailed Information for Phage Shayna |
Discovery Information |
Isolation Host | Curtobacterium flaccumfaciens NRRL B-729 SEA |
Found By | Serena Slatas |
Year Found | 2024 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Phage Hunters Integrating Research and Education |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 40.44153 N, 79.95508 W Map |
Discovery Notes | This phage was found outside of Posvar Hall. It was collected on 3/19/2024. |
Naming Notes | This phage is named after my dog. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jun 4, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 10088 |
Genome length (bp) | 41333 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | ACTCCCGGCA |
GC Content | 65.7% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EB |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | University of Pittsburgh |
Annotation Status | Being Annotated (Expected completion by 12/4/2024) |
Morphotype | Siphoviridae |
Has been Phamerated? | Yes |
Gene List |
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Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |