| Detailed Information for Phage Altheas | |
| Discovery Information | |
| Isolation Host | Microbacterium foliorum NRRL B-24224 |
| Found By | Ashley Prout |
| Year Found | 2018 |
| Location Found | Baltimore, MD United States |
| Finding Institution | Thiel College |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 39°C |
| GPS Coordinates | 39.255297 N, 76.707834 W Map |
| Discovery Notes | It was found during the HHMI training at UMBC. |
| Naming Notes | It's a mix of my name and my brother's. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Sep 20, 2022 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 354 |
| Genome length (bp) | 62808 |
| Character of genome ends | Direct Terminal Repeat |
| Direct Terminal Repeat Length | 241 bp |
| GC Content | 67.0% |
| Sequencing Notes | Approximately 70% of the reads from this genome indicate that there is a population with a 4592 bp deletion from position 55171 to 59762, inclusive. Though the subpopulation with the deletion was more common in the sample that was prepped for sequencing, we report the longer (undeleted) genome as the complete genome sequence here, otherwise the deleted bases are "lost". |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | EG |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
Click to ViewAltheas AluminumJesus BabyDotz BirdInFrench Blab CandC Casend DonaldDuck EverythinBagel Fizzles FrankDeliGuy Fransoyer Fregley Gazebo Grassboy Hyperion Jehoshaphat Judebell Kelcole Kyva Llemily Lonelysoil Marcie Mashley MorillMayhem Namago Nike OneinaGillian Pepe25 Phabia Phinky Quammi RobinRose Romm Rowlf RubyRalph Rudy SadLad SallyK Sillytadpoles Squash Statler StrawberryJamm Teehee Tempo Tissue Viceroy Wayne3 Wheelie Wilca Zagie Zhafia |
| Annotating Institution | Thiel College |
| Annotation Status | Overdue (Expected completion by 12/1/2023) |
| Number of Genes | 107 |
| Number of tRNAs | 1 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewAltheas_1 Altheas_2 Altheas_3 Altheas_4 Altheas_5 Altheas_6 Altheas_7 Altheas_8 Altheas_9 Altheas_10 Altheas_11 Altheas_12 Altheas_13 Altheas_14 Altheas_15 Altheas_16 Altheas_17 Altheas_18 Altheas_19 Altheas_20 Altheas_21 Altheas_22 Altheas_23 — tRNA Altheas_24 Altheas_25 Altheas_26 Altheas_27 Altheas_28 Altheas_29 Altheas_30 Altheas_31 Altheas_32 Altheas_33 Altheas_34 Altheas_35 Altheas_36 Altheas_37 Altheas_38 Altheas_39 Altheas_40 Altheas_41 Altheas_42 Altheas_43 Altheas_44 Altheas_45 Altheas_46 Altheas_47 Altheas_48 Altheas_49 Altheas_50 Altheas_51 Altheas_52 Altheas_53 Altheas_54 Altheas_55 Altheas_56 Altheas_57 Altheas_58 Altheas_59 Altheas_60 Altheas_61 Altheas_62 Altheas_63 Altheas_64 Altheas_65 Altheas_66 Altheas_67 Altheas_68 Altheas_69 Altheas_70 Altheas_71 Altheas_72 Altheas_73 Altheas_74 Altheas_75 Altheas_76 Altheas_77 Altheas_78 Altheas_79 Altheas_80 Altheas_81 Altheas_82 Altheas_83 Altheas_84 Altheas_85 Altheas_86 Altheas_87 Altheas_88 Altheas_89 Altheas_90 Altheas_91 Altheas_92 Altheas_93 Altheas_94 Altheas_95 Altheas_96 Altheas_97 Altheas_98 Altheas_99 Altheas_100 Altheas_101 Altheas_102 Altheas_103 Altheas_104 Altheas_105 Altheas_106 Altheas_107 Altheas_108 |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Not in Pitt Archives |