Microbacterium phage Casend
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage Casend
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224
Found ByJill Townsend and Meghan Casey
Year Found2017
Location FoundSpokane, WA USA
Finding InstitutionGonzaga University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature24°C
GPS Coordinates47.671731 N, 117.402676 W Map
Discovery NotesGrown at 24°C
Naming NotesMixed last names of the finders Meghan Casey and Jill Townsend
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 7, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage2270
Genome length (bp)62461
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length204 bp
GC Content66.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEG
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionGonzaga University
Annotation StatusIn GenBank
Plaque NotesClear plaques that are circular in a size ranging from 2-5ml
Has been Phamerated?Yes
Gene List

Click to View

Casend_1

Casend_2

Casend_3

Casend_4

Casend_5

Casend_6

Casend_7
(histidine triad nucleotide binding protein)

Casend_8

Casend_9

Casend_10

Casend_11
(DprA-like DNA processing chain A)

Casend_12

Casend_13

Casend_14
(helix-turn-helix DNA binding domain protein)

Casend_15
(helix-turn-helix DNA binding domain protein)

Casend_16
(ribbon-helix-helix DNA binding domain protein)

Casend_17

Casend_18

Casend_19

Casend_20
(ribbon-helix-helix DNA binding domain protein)

Casend_21
(terminase)

Casend_22

Casend_23
(portal protein)

Casend_24
(capsid maturation protease and MuF-like fusion protein)

Casend_25

Casend_26
(major capsid protein)

Casend_27

Casend_28

Casend_29
(major tail protein)

Casend_30

Casend_31
(phosphoesterase)

Casend_32
(head-to-tail adaptor)

Casend_33

Casend_34

Casend_35
(tail assembly chaperone)

Casend_36
(tail assembly chaperone)

Casend_37
(tape measure protein)

Casend_38
(minor tail protein)

Casend_39
(minor tail protein)

Casend_40
(minor tail protein)

Casend_41

Casend_42

Casend_43

Casend_44

Casend_45

Casend_46
(endolysin)

Casend_47

Casend_48

Casend_49
(DnaJ-like chaperonin)

Casend_50

Casend_51

Casend_52
(RecA-like DNA recombinase)

Casend_53
(HNH endonuclease)

Casend_54
(RuvC-like resolvase)

Casend_55

Casend_56

Casend_57
(MazG-like nucleotide pyrophosphohydrolase)

Casend_58
(ssDNA binding protein)

Casend_59

Casend_60

Casend_61

Casend_62

Casend_63

Casend_64

Casend_65

Casend_66

Casend_67

Casend_68

Casend_69

Casend_70
(DNA primase/helicase)

Casend_71

Casend_72

Casend_73

Casend_74

Casend_75

Casend_76

Casend_77

Casend_78

Casend_79

Casend_80

Casend_81

Casend_82

Casend_83

Casend_84

Casend_85

Casend_86

Casend_87

Casend_88

Casend_89

Casend_90

Casend_91

Casend_92

Casend_93

Casend_94

Casend_95

Casend_96

Casend_97

Casend_98

Casend_99

Casend_100

Casend_101

Casend_102

Casend_103

Casend_104

Casend_105

Casend_106

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMT657333
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 64
Pitt Freezer Box Grid# C1
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload