Detailed Information for Phage Zhafia |
Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Kira Bifone, Giselle Tevlin |
Year Found | 2022 |
Location Found | Spokane, WA United States |
Finding Institution | Gonzaga University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 22°C |
GPS Coordinates | 47.668573 N, 117.403505 W Map |
Discovery Notes | On August 30, 2022, when the soil sample was collected the soil was slightly damp. It was easy to scoop and found surrounded by grass. The weather was warm. |
Naming Notes | Combination of two friends' names. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Sep 6, 2023 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 112 |
Genome length (bp) | 62287 |
Character of genome ends | Direct Terminal Repeat |
Direct Terminal Repeat Length | 199 bp |
GC Content | 66.9% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EG |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | Gonzaga University |
Annotation Status | Being Annotated (Expected completion by 2/1/2025) |
Plaque Notes | Plaques from the phage Zhafia are small and cloudy around the edges. They range in size from 1 mm to 5mm when grouped in close proximity. |
Morphotype | Siphoviridae |
Has been Phamerated? | Yes |
Gene List |
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Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
166 |
Pitt Freezer Box Grid# |
B1 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |