Microbacterium phage Quammi
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Detailed Information for Phage Quammi
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224
Found BySamantha Rustia and Quincy Neal
Year Found2018
Location FoundSpokane, WA USA
Finding InstitutionGonzaga University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates47.667333 N, 117.402917 W Map
Discovery NotesRoom Temperature
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 29, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1475
Genome length (bp)61903
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length203 bp
GC Content66.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEG
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionGonzaga University
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Quammi_1

Quammi_2

Quammi_3

Quammi_4

Quammi_5

Quammi_6
(histidine triad nucleotide binding protein)

Quammi_7
(PnuC-like nicotinamide riboside transporter)

Quammi_8
(DprA-like DNA processing chain A)

Quammi_9

Quammi_10

Quammi_11
(helix-turn-helix DNA binding domain)

Quammi_12
(helix-turn-helix DNA binding domain)

Quammi_13
(ribbon-helix-helix DNA binding domain)

Quammi_14
(helix-turn-helix DNA binding domain)

Quammi_15

Quammi_16

Quammi_17
(ribbon-helix-helix DNA binding domain)

Quammi_18
(terminase)

Quammi_19

Quammi_20
(portal protein)

Quammi_21
(capsid maturation protease and MuF-like fusion protein)

Quammi_22

Quammi_23
(major capsid protein)

Quammi_24

Quammi_25

Quammi_26
(major tail protein)

Quammi_27

Quammi_28
(phosphoesterase)

Quammi_29
(head-to-tail adaptor)

Quammi_30

Quammi_31

Quammi_32
(tail assembly chaperone)

Quammi_33
(tail assembly chaperone)

Quammi_34
(tape measure protein)

Quammi_35
(minor tail protein)

Quammi_36
(minor tail protein)

Quammi_37
(minor tail protein)

Quammi_38

Quammi_39

Quammi_40

Quammi_41

Quammi_42

Quammi_43
(endolysin)

Quammi_44

Quammi_45

Quammi_46
(chaperonin, DnaJ-like)

Quammi_47

Quammi_48
(Cas4 family exonuclease)

Quammi_49
(DNA recombinase)

Quammi_50
(HNH endonuclease)

Quammi_51
(RuvC-like resolvase)

Quammi_52

Quammi_53

Quammi_54
(MazG-like nucleotide pyrophosphohydrolase)

Quammi_55
(ssDNA binding protein)

Quammi_56

Quammi_57

Quammi_58

Quammi_59

Quammi_60

Quammi_61

Quammi_62

Quammi_63

Quammi_64

Quammi_65

Quammi_66

Quammi_67

Quammi_68
(DNA primase/helicase)

Quammi_69

Quammi_70
(ribbon-helix-helix DNA binding domain)

Quammi_71

Quammi_72

Quammi_73

Quammi_74

Quammi_75

Quammi_76

Quammi_77

Quammi_78

Quammi_79

Quammi_80

Quammi_81

Quammi_82

Quammi_83

Quammi_84

Quammi_85

Quammi_86

Quammi_87

Quammi_88

Quammi_89

Quammi_90

Quammi_91

Quammi_92

Quammi_93

Quammi_94

Quammi_95

Quammi_96

Quammi_97

Quammi_98

Quammi_99

Quammi_100

Quammi_101

Quammi_102

Quammi_103

Quammi_104

Quammi_105

Quammi_106

Quammi_107

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMW712728
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 95
Pitt Freezer Box Grid# C5
Available Files
EM PictureDownload
GenBank File for PhameratorDownload