Microbacterium phage Fregley
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage Fregley
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224
Found ByAlexis Thomas
Year Found2022
Location FoundAmherst, MA United States
Finding InstitutionUniversity of Massachusetts Amherst
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates42.388053 N, 72.527593 W Map
Discovery NotesNear Herter Annex dirt patch. Not near any trees but bushes were present
Naming NotesDiary of a Wimpy Kid
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedAug 31, 2022
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1692
Genome length (bp)62291
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length203 bp
GC Content67.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEG
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Massachusetts Amherst
Annotation StatusIn GenBank
Plaque NotesThe plaques are small, circular (round edges), and partially clear/ translucent and cloudy throughout the plaque. Most of the plaques were 1-2 mm but we chose plaques that were about 2-3mm in diameter

About 15 plaques
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

Fregley_1

Fregley_2

Fregley_3

Fregley_4

Fregley_5

Fregley_6

Fregley_7

Fregley_8

Fregley_9

Fregley_10

Fregley_11

Fregley_12
(helix-turn-helix DNA binding domain protein)

Fregley_13
(helix-turn-helix DNA binding domain protein)

Fregley_14

Fregley_15
(ribbon-helix-helix DNA binding domain protein)

Fregley_16

Fregley_17

Fregley_18

Fregley_19
(ribbon-helix-helix DNA binding domain protein)

Fregley_20
(terminase)

Fregley_21

Fregley_22
(portal protein)

Fregley_23
(capsid maturation protease)

Fregley_24

Fregley_25
(major capsid hexamer protein)

Fregley_26

Fregley_27

Fregley_28
(major tail protein)

Fregley_29

Fregley_30
(phosphoesterase)

Fregley_31
(head-to-tail adaptor)

Fregley_32

Fregley_33

Fregley_34
(tail assembly chaperone)

Fregley_35

Fregley_36
(tape measure protein)

Fregley_37
(minor tail protein)

Fregley_38
(minor tail protein)

Fregley_39
(minor tail protein)

Fregley_40

Fregley_41

Fregley_42

Fregley_43

Fregley_44

Fregley_45

Fregley_46
(endolysin)

Fregley_47

Fregley_48

Fregley_49

Fregley_50

Fregley_51

Fregley_52

Fregley_53

Fregley_54
(HNH endonuclease)

Fregley_55

Fregley_56

Fregley_57
(exonuclease)

Fregley_58

Fregley_59
(DNA recombinase)

Fregley_60
(HNH endonuclease)

Fregley_61
(RusA-like resolvase)

Fregley_62

Fregley_64
(SSB protein)

Fregley_65

Fregley_66

Fregley_67

Fregley_68

Fregley_69

Fregley_70

Fregley_71

Fregley_72

Fregley_73

Fregley_74
(DNA primase/helicase)

Fregley_75

Fregley_76

Fregley_77

Fregley_78

Fregley_79

Fregley_80

Fregley_81

Fregley_82

Fregley_83

Fregley_84

Fregley_85

Fregley_86

Fregley_87

Fregley_88

Fregley_89

Fregley_90

Fregley_91

Fregley_92

Fregley_93

Fregley_94

Fregley_95

Fregley_96

Fregley_97

Fregley_98

Fregley_99

Fregley_100

Fregley_101

Fregley_102

Fregley_103

Fregley_104

Fregley_105

Fregley_106

Fregley_107

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOR553896
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 158
Pitt Freezer Box Grid# D3
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload