Microbacterium phage Namago
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Detailed Information for Phage Namago
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224
Found BySarah Vetsch and Sam Sampinos
Year Found2017
Location FoundSpokane, WA USA
Finding InstitutionGonzaga University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature22°C
GPS Coordinates47.66652 N, 117.399915 W Map
Discovery NotesSample of enriched soil from between Foley Library and Mulligan Field on Gonzaga University's Campus
Naming NotesNamago is a play off the Buddhist word Namaste
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 29, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage643
Genome length (bp)61793
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length199 bp
GC Content66.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEG
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionGonzaga University
Annotation StatusIn GenBank
Plaque Notesvery small clear spots between 0.2-0.3 of a cm
Has been Phamerated?Yes
Gene List

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Namago_1

Namago_2

Namago_3

Namago_4

Namago_5

Namago_6

Namago_7

Namago_8

Namago_9

Namago_10
(DprA-like DNA processing chain A)

Namago_11

Namago_12

Namago_13
(helix-turn-helix DNA binding domain protein)

Namago_14
(helix-turn-helix DNA binding domain protein)

Namago_15
(ribbon-helix-helix DNA binding domain protein)

Namago_16
(helix-turn-helix DNA binding domain protein)

Namago_17

Namago_18

Namago_19
(ribbon-helix-helix DNA binding domain protein)

Namago_20
(terminase)

Namago_21

Namago_22
(portal protein)

Namago_23
(capsid maturation protease and MuF-like fusion protein)

Namago_24

Namago_25
(major capsid protein)

Namago_26

Namago_27

Namago_28
(major tail protein)

Namago_29

Namago_30
(phosphoesterase)

Namago_31
(head-to-tail adaptor)

Namago_32

Namago_33

Namago_34
(tail assembly chaperone)

Namago_35
(tail assembly chaperone)

Namago_36
(tape measure protein)

Namago_37
(minor tail protein)

Namago_38
(minor tail protein)

Namago_39
(minor tail protein)

Namago_40

Namago_41

Namago_42

Namago_43

Namago_44

Namago_45
(endolysin)

Namago_46

Namago_47

Namago_48
(DnaJ-like chaperonin)

Namago_49

Namago_50
(Cas4 family exonuclease)

Namago_51
(RecA-like DNA recombinase)

Namago_52
(HNH endonuclease)

Namago_53

Namago_54
(RuvC-like resolvase)

Namago_55

Namago_56

Namago_57
(MazG-like nucleotide pyrophosphohydrolase)

Namago_58
(ssDNA binding protein)

Namago_59

Namago_60

Namago_61

Namago_62

Namago_63

Namago_64

Namago_65

Namago_66

Namago_67

Namago_68

Namago_69

Namago_70
(DNA primase/helicase)

Namago_71

Namago_72
(ribbon-helix-helix DNA binding domain protein)

Namago_73

Namago_74

Namago_75

Namago_76

Namago_77

Namago_78

Namago_79

Namago_80

Namago_81

Namago_82

Namago_83

Namago_84

Namago_85

Namago_86

Namago_87

Namago_88

Namago_89

Namago_90

Namago_91

Namago_92

Namago_93

Namago_94

Namago_95

Namago_96

Namago_97

Namago_98

Namago_99

Namago_100

Namago_101

Namago_102

Namago_103

Namago_104

Namago_105

Namago_106

Namago_107

Namago_108

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMW365949
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 65
Pitt Freezer Box Grid# B6
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload