Gordonia phage Arri
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Detailed Information for Phage Arri
Discovery Information
Isolation HostGordonia terrae 3612
Found ByMadeline M Borsos
Year Found2017
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature27°C
GPS Coordinates40.4406 N, 79.9959 W Map
Discovery NotesArri was discovered in the mulch bed beneath an apple tree at the South Oakland Community Orchard.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 19, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage1792
Genome length (bp)58650
Character of genome endsCircularly Permuted
GC Content67.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDC
SubclusterDC1
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionGettysburg College
Annotation StatusIn GenBank
Plaque NotesSmall plaques (less than 1mm in diameter), plentiful.
MorphotypeSiphoviridae
Number of Genes94
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Arri_1
(helix-turn-helix DNA-binding domain protein)

Arri_2

Arri_3

Arri_4

Arri_5
(terminase)

Arri_6

Arri_7

Arri_8
(helix-turn-helix DNA-binding domain protein)

Arri_9

Arri_10

Arri_11
(polynucleotide kinase)

Arri_12

Arri_13
(portal protein)

Arri_14

Arri_15
(capsid maturation protease and MuF-like fusion protein)

Arri_16

Arri_17

Arri_18
(ribbon-helix-helix DNA binding domain protein)

Arri_19

Arri_20
(RNA ligase)

Arri_21

Arri_22
(major capsid hexamer protein)

Arri_23

Arri_24

Arri_25
(major tail protein)

Arri_26
(head-to-tail adaptor)

Arri_27

Arri_28

Arri_29

Arri_30
(tail assembly chaperone)

Arri_31

Arri_32
(tape measure protein)

Arri_33
(minor tail protein)

Arri_34
(minor tail protein)

Arri_35

Arri_36
(minor tail protein)

Arri_37

Arri_38

Arri_39
(minor tail protein)

Arri_40

Arri_41

Arri_42
(lysin A)

Arri_43
(holin)

Arri_44

Arri_45

Arri_46

Arri_47
(lysin B)

Arri_48
(integrase)

Arri_49

Arri_50
(integrase)

Arri_51
(immunity repressor)

Arri_52
(helix-turn-helix DNA-binding domain protein)

Arri_53

Arri_54

Arri_55

Arri_56
(exonuclease)

Arri_57

Arri_58

Arri_59

Arri_60
(DNA methyltransferase)

Arri_61
(helix-turn-helix DNA-binding domain protein)

Arri_62
(helix-turn-helix DNA-binding domain protein)

Arri_63

Arri_64
(RuvC-like resolvase)

Arri_65

Arri_66

Arri_67

Arri_68

Arri_69

Arri_70

Arri_71

Arri_72

Arri_73
(nicotinamide riboside transporter)

Arri_74

Arri_75

Arri_76

Arri_77

Arri_78

Arri_79

Arri_80

Arri_81

Arri_82
(DNA methylase)

Arri_83

Arri_84

Arri_85
(HNH endonuclease)

Arri_86
(helix-turn-helix DNA-binding domain protein)

Arri_87

Arri_88

Arri_89

Arri_90

Arri_91

Arri_92

Arri_93

Arri_94

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK864266
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 56
Pitt Freezer Box Grid# H1
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
GenBank File for PhameratorDownload