Detailed Information for Phage Bachaco |
Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Juan de Jesus Contreras Jimenez |
Year Found | 2021 |
Location Found | Saint Leo, FL USA |
Finding Institution | Saint Leo University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 28.3383 N, 82.2568 W Map |
Discovery Notes | In a grass field, damp soil near (-3 m) of a tree, sample collected at a depth < 6 cm. |
Naming Notes | “Bachaco,” Venezuelan common name for the leafcutter ant. A voracious, destructive species that can clear whole lawns and crops |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Oct 28, 2022 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 2258 |
Genome length (bp) | 42403 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | ACTCCCGGCA |
GC Content | 67.8% |
Sequencing Notes | There were some Cluster EE phages contaminating the sequencing reads of this sample. |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EB |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | Saint Leo University |
Annotation Status | In GenBank |
Number of Genes | 64 |
Number of tRNAs | 2 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | PQ362671 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
146 |
Pitt Freezer Box Grid# |
D4 |
Available Files |
GenBank File for Phamerator | Download |