Microbacterium phage Bachaco
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Detailed Information for Phage Bachaco
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224
Found ByJuan de Jesus Contreras Jimenez
Year Found2021
Location FoundSaint Leo, FL USA
Finding InstitutionSaint Leo University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates28.3383 N, 82.2568 W Map
Discovery NotesIn a grass field, damp soil near (-3 m) of a tree, sample collected at a depth < 6 cm.
Naming Notes“Bachaco,” Venezuelan common name for the leafcutter ant. A voracious, destructive species that can clear whole lawns and crops
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedOct 28, 2022
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage2258
Genome length (bp)42403
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceACTCCCGGCA
GC Content67.8%
Sequencing NotesThere were some Cluster EE phages contaminating the sequencing reads of this sample.
Fasta file available?Yes: Download fasta file
Characterization
ClusterEB
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionSaint Leo University
Annotation StatusIn GenBank
Number of Genes64
Number of tRNAs2
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Bachaco_1

Bachaco_2
(terminase small subunit)

Bachaco_3
(terminase large subunit)

Bachaco_4
(portal protein)

Bachaco_5
(capsid maturation protease)

Bachaco_6
(major capsid protein)

Bachaco_7

Bachaco_8
(head-to-tail adaptor)

Bachaco_9
(head-to-tail stopper)

Bachaco_10

Bachaco_11
(tail terminator)

Bachaco_12
(major tail protein)

Bachaco_13
(tail assembly chaperone)

Bachaco_14
(tail assembly chaperone)

Bachaco_15
(tape measure protein)

Bachaco_16
(minor tail protein)

Bachaco_17
(minor tail protein)

Bachaco_18
(minor tail protein)

Bachaco_19

Bachaco_20
(endolysin)

Bachaco_21

Bachaco_22

Bachaco_23

Bachaco_24

Bachaco_25

Bachaco_26
(Cas4 exonuclease)

Bachaco_27

Bachaco_28
(HicA-like toxin)

Bachaco_29
(deoxyuridine triphosphatase)

Bachaco_30
(thymidylate kinase)

Bachaco_31
(recombination directionality factor)

Bachaco_32

Bachaco_33

Bachaco_34
(NrdH-like glutaredoxin)

Bachaco_35
(Holliday junction resolvase)

Bachaco_36

Bachaco_37

Bachaco_38

Bachaco_39
(DNA primase/helicase)

Bachaco_40
(DNA polymerase I)

Bachaco_41

Bachaco_42

Bachaco_43
(DNA binding protein)

Bachaco_44

Bachaco_45
(SprT-like protease)

Bachaco_46
(ParB-like nuclease domain protein)

Bachaco_47

Bachaco_48

Bachaco_49

Bachaco_50
(HNH endonuclease)

Bachaco_51

Bachaco_52

Bachaco_53

Bachaco_54

Bachaco_55
(dihydrofolate reductase)

Bachaco_56

Bachaco_57
(thymidylate synthase)

Bachaco_58

Bachaco_59

Bachaco_60

Bachaco_61

Bachaco_62

Bachaco_63

Bachaco_64 — tRNA
(tRNA-Asn(gtt))

Bachaco_65 — tRNA
(tRNA-Gln(ctg))

Bachaco_66
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPQ362671
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 146
Pitt Freezer Box Grid# D4
Available Files
GenBank File for PhameratorDownload