Detailed Information for Phage BubbaBear |
Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Evelyn Ary |
Year Found | 2018 |
Location Found | Manhattan, KS USA |
Finding Institution | Kansas State University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 13°C |
GPS Coordinates | 39.195682 N, 96.575696 W Map |
Discovery Notes | Sample found near garbage and building, soil was rocky and wet from rain the previous night. Soil taken from an inch below the surface. Outside temperature was 12.78°C. |
Naming Notes | This name is in honor of my dog Bear (05/2003-09/22/2018) who was a great dog and survived through many medical emergencies and inspired me to become a vet. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 29, 2019 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 58 |
Genome length (bp) | 41814 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | TCTCCCGGCA |
GC Content | 66.6% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EB |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | Kansas State University |
Annotation Status | In GenBank |
Number of Genes | 68 |
Number of tRNAs | 1 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MK814753 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
1x10^-9 |
Pitt Freezer Box# |
80 |
Pitt Freezer Box Grid# |
F3 |
Available Files |
GenBank File for Phamerator | Download |