Detailed Information for Phage Coltrane |
Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Kerry Iles |
Year Found | 2017 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Phage Hunters Integrating Research and Education |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 40.444253 N, 79.953239 W Map |
Naming Notes | Named after John Coltrane |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Apr 20, 2018 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 664 |
Genome length (bp) | 39828 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | ACTCCCGGCA |
GC Content | 67.1% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EB |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | University of Pittsburgh |
Annotation Status | In GenBank |
Plaque Notes | Plaques are primarily clear and 3 mm in diameter with intermittent pinpoint plaques. |
Number of Genes | 68 |
Number of tRNAs | 2 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MH834604 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
7 |
Pitt Freezer Box Grid# |
A5 |
Available Files |
Plaque Picture | Download |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |