Gordonia phage CoveyB
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Detailed Information for Phage CoveyB
Discovery Information
Isolation HostGordonia terrae 3612
Former namesDeee
Found ByJacie Vander Waal
Year Found2023
Location FoundSioux Center, IA United States
Finding InstitutionNorthwestern College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates43.0798 N, 96.1757 W Map
Discovery NotesThis soil sample was taken from a corn field located near fertilizer piles on August 22. The soil was very dry and crumbly.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedAug 29, 2024
Sequencing FacilityNorthwestern College of Iowa
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage483
Genome length (bp)59001
Character of genome endsCircularly Permuted
GC Content67.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDC
SubclusterDC1
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionNorthwestern College
Annotation StatusQC Complete
Plaque NotesThis plaque is clear and approximately 2 mm in diameter.
Number of Genes96
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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CoveyB_1
(helix-turn-helix DNA binding domain)

CoveyB_2

CoveyB_3

CoveyB_4

CoveyB_5
(terminase)

CoveyB_6

CoveyB_7

CoveyB_8
(ASC-1 transcription coactivator)

CoveyB_9

CoveyB_10
(polynucleotide kinase)

CoveyB_11

CoveyB_12
(portal protein)

CoveyB_13

CoveyB_14
(ADP-ribosyltransferase)

CoveyB_15

CoveyB_16

CoveyB_17
(ribbon-helix-helix DNA binding domain)

CoveyB_18
(capsid maturation protease)

CoveyB_19
(RNA ligase)

CoveyB_20

CoveyB_21
(major capsid hexamer protein)

CoveyB_22

CoveyB_23

CoveyB_24
(major tail protein)

CoveyB_25
(head-to-tail adaptor)

CoveyB_26

CoveyB_27

CoveyB_28

CoveyB_29
(tail assembly chaperone)

CoveyB_30

CoveyB_31
(tape measure protein)

CoveyB_32
(minor tail protein)

CoveyB_33
(minor tail protein)

CoveyB_34

CoveyB_35
(minor tail protein)

CoveyB_36

CoveyB_37

CoveyB_38
(minor tail protein)

CoveyB_39

CoveyB_40

CoveyB_41

CoveyB_42
(lysin A)

CoveyB_43

CoveyB_44

CoveyB_45

CoveyB_46

CoveyB_47
(lysin B)

CoveyB_48
(serine integrase)

CoveyB_49

CoveyB_50
(tyrosine integrase)

CoveyB_51
(immunity repressor)

CoveyB_52
(helix-turn-helix DNA binding domain)

CoveyB_53

CoveyB_54

CoveyB_55

CoveyB_56
(RecE-like exonuclease)

CoveyB_57
(RecT-like DNA pairing protein)

CoveyB_58

CoveyB_59

CoveyB_60
(DNA methyltransferase)

CoveyB_61
(helix-turn-helix DNA binding domain)

CoveyB_62
(helix-turn-helix DNA binding domain)

CoveyB_63

CoveyB_64
(RuvC-like resolvase)

CoveyB_65

CoveyB_66

CoveyB_67

CoveyB_68

CoveyB_69

CoveyB_70

CoveyB_71

CoveyB_72

CoveyB_73
(nicotinate ribosyltransferase)

CoveyB_74

CoveyB_75

CoveyB_76

CoveyB_77

CoveyB_78

CoveyB_79

CoveyB_80

CoveyB_81

CoveyB_82

CoveyB_83
(DNA methyltransferase)

CoveyB_84

CoveyB_85

CoveyB_86
(chaperonin, DnaJ-like)

CoveyB_87
(helix-turn-helix DNA binding domain)

CoveyB_88

CoveyB_89

CoveyB_90

CoveyB_91

CoveyB_92

CoveyB_93

CoveyB_94

CoveyB_95

CoveyB_96

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 173
Pitt Freezer Box Grid# B6
Available Files
Plaque PictureDownload
GenBank File for PhameratorDownload