Detailed Information for Phage Eden |
Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Kat Hebert, Dakota Archambault, and John Massaad |
Year Found | 2017 |
Location Found | Orono, ME USA |
Finding Institution | University of Maine, Honors College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 44.897522 N, 68.667564 W Map |
Discovery Notes | The soil was dark in color and moist when collected. |
Naming Notes | We found it in a garden on the University of Maine campus- the garden of Eden pun was too much to pass up! |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Mar 7, 2018 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 7600 |
Genome length (bp) | 40833 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | ACTCCCGGCA |
GC Content | 66.3% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EB |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | University of Maine, Honors College |
Annotation Status | In GenBank |
Plaque Notes | Both turbid and clear plaques occur on a lawn of M. foliorum. The clear plaques measure 2 mm in diameter and the turbid plaques measure 1 mm in diameter. |
Morphotype | Siphoviridae |
Number of Genes | 69 |
Number of tRNAs | 3 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MH509447 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
73 |
Pitt Freezer Box Grid# |
A8 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |