| Detailed Information for Phage Gudmit |
| Discovery Information |
| Isolation Host | Gordonia terrae 3612 |
| Found By | Shefali Savarirayan |
| Year Found | 2017 |
| Location Found | Pittsburgh, PA USA |
| Finding Institution | University of Pittsburgh |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | Not entered |
| GPS Coordinates | 40.4 N, 80.0 W Map |
| Discovery Notes | It was wet and the soil had an almost liquid consistency. |
| Naming Notes | This is a combination of my sister's and my name (Mitu and Guddu). |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Oct 3, 2017 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 2069 |
| Genome length (bp) | 42205 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | TCCCCCGGCG |
| GC Content | 65.9% |
| Sequencing Notes | 25% of population contains an 81 bp deletion of wt sequence 20721 - 20801 bp
at position 20754 approximately 50% of reads contain a G instead of consensus A |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | Singleton |
| Subcluster | -- |
| Cluster Life Cycle | Unknown |
| Lysogeny Notes | It is lysogenic. |
| Other Cluster Members |
|
| Annotating Institution | University of Pittsburgh |
| Annotation Status | In GenBank |
| Plaque Notes | This is a small plaque with a miniature halo around it. |
| Morphotype | Siphoviridae |
| Number of Genes | 73 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MN813685 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| SEA Lysate Titer |
9.0 X 10^9 |
| Date of SEA Lysate Titering |
Apr 5, 2017 |
| Pitt Freezer Box# |
55 |
| Pitt Freezer Box Grid# |
G4 |
| Available Files |
| Plaque Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
