Detailed Information for Phage IndyLu |
Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Ashley Suris/Jamie Merrill/Raylon Huckabee |
Year Found | 2020 |
Location Found | Stephenville, TX United States |
Finding Institution | Tarleton State University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Unknown |
Isolation Temperature | 33°C |
GPS Coordinates | 32.248 N, 98.209 W Map |
Discovery Notes | Near a horse barn in a dry environment |
Naming Notes | A combination of my two labradors' names |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 4, 2021 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 1156 |
Genome length (bp) | 41958 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | ACTCCCGACA |
GC Content | 66.2% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EB |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | Tarleton State University |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 71 |
Number of tRNAs | 1 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | OK318958 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
3.0 x 10^8 |
Pitt Freezer Box# |
117 |
Pitt Freezer Box Grid# |
D6 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |