| Detailed Information for Phage Lahqtemish |
| Discovery Information |
| Isolation Host | Microbacterium foliorum NRRL B-24224 |
| Found By | Lauryl Azure |
| Year Found | 2019 |
| Location Found | Bellingham, WA USA |
| Finding Institution | Northwest Indian College |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 28°C |
| GPS Coordinates | 48.670556 N, 122.734167 W Map |
| Discovery Notes | The phage was isolated from sandy soil obtained from a grassy lawn. Isolating, purifying and amplifying this phage was a group project undertaken by the cell biology class at Northwest Indian College. |
| Naming Notes | Lahqtemish is a Coast Salish word that means "people of the sea" |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 2, 2020 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 691 |
| Genome length (bp) | 42174 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | ACTCCCGACA |
| GC Content | 66.3% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | EB |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Northwest Indian College |
| Annotation Status | In GenBank |
| Plaque Notes | This is a lytic phage that makes circular, well-defined plaques 3-10 mm in diameter. |
| Number of Genes | 69 |
| Number of tRNAs | 1 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MT889392 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
183 |
| Pitt Freezer Box Grid# |
G11 |
| Available Files |
| GenBank File for Phamerator | Download |