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Detailed Information for Phage MiaZeal
Discovery Information
Isolation Host	Mycobacterium smegmatis mc²155
Found By	Ashley Morel
Year Found	2012
Location Found	New York, NY USA
Finding Institution	Cabrini University
Program	Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?	Unknown
Isolation Temperature	Not entered
GPS Coordinates	40.857999 N, 73.93562 W Map
Discovery Notes	soil taken near the shrine on Mother Cabrini High School's campus
Sequencing Information
Sequencing Complete?	Yes
Date Sequencing Completed	Apr 8, 2013
Sequencing Facility	Pittsburgh Bacteriophage Institute
Shotgun Sequencing Method	Ion Torrent Sequencing
Approximate Shotgun Coverage	545
Sanger Finishing Reactions	26
Genome length (bp)	110764
Character of genome ends	3' Sticky Overhang
Overhang Length	4 bases
Overhang Sequence	ATCC
GC Content	61.2%
Fasta file available?	Yes: Download fasta file
Characterization
Cluster	J
Subcluster	--
Cluster Life Cycle	Temperate
Other Cluster Members	Click to View Ariel Bagrid BAKA Beem Bobby Bombitas Constella Courthouse Dallas DmpstrDiver Dove Duke13 Ejimix EricMillard Gonephishing Halley Hannaconda HokkenD Hughesyang JuicyJay Kalah2 KashFlow Klein LittleE Lucky2013 MiaZeal Minerva NihilNomen Odette Omega Optimus Phoebus Porcelain Pound Redno2 Schatzie Squint Superphikiman Thibault ThreeRngTarjay Wanda Yeet Zelink
Annotating Institution	Unknown or unassigned
Annotation Status	In GenBank
Morphotype	Siphoviridae
Number of Genes	250
Number of tRNAs	2
Number of tmRNAs	0
Has been Phamerated?	Yes
Gene List	Click to View MiaZeal_1 (HNH endonuclease) MiaZeal_2 MiaZeal_3 MiaZeal_4 MiaZeal_5 MiaZeal_6 MiaZeal_7 MiaZeal_8 MiaZeal_9 MiaZeal_10 (terminase) MiaZeal_11 MiaZeal_12 (portal protein) MiaZeal_13 (capsid maturation protease) MiaZeal_14 (major capsid protein) MiaZeal_15 (O-methyltransferase) MiaZeal_16 (glycosyltransferase) MiaZeal_17 (glycosyltransferase) MiaZeal_18 MiaZeal_19 MiaZeal_20 MiaZeal_21 (glycosyltransferase) MiaZeal_22 MiaZeal_23 (head-to-tail adaptor) MiaZeal_24 (head-to-tail stopper) MiaZeal_25 MiaZeal_26 (tail terminator) MiaZeal_27 MiaZeal_28 MiaZeal_29 (major tail protein) MiaZeal_31 (tail assembly chaperone) MiaZeal_30 (tail assembly chaperone) MiaZeal_32 (tape measure protein) MiaZeal_33 (minor tail protein) MiaZeal_34 (minor tail protein) MiaZeal_35 (minor tail protein) MiaZeal_36 (minor tail protein) MiaZeal_37 (minor tail protein) MiaZeal_38 (minor tail protein) MiaZeal_39 MiaZeal_40 MiaZeal_41 MiaZeal_42 MiaZeal_43 MiaZeal_44 MiaZeal_45 MiaZeal_46 (HNH endonuclease) MiaZeal_47 (lysin A) MiaZeal_48 (lysin B) MiaZeal_49 (holin) MiaZeal_50 MiaZeal_51 (thioredoxin) MiaZeal_52 MiaZeal_53 MiaZeal_54 MiaZeal_55 MiaZeal_56 (Lsr2-like DNA bridging protein) MiaZeal_57 MiaZeal_58 MiaZeal_59 MiaZeal_60 MiaZeal_61 MiaZeal_62 MiaZeal_63 MiaZeal_64 MiaZeal_65 MiaZeal_66 MiaZeal_67 MiaZeal_68 MiaZeal_69 MiaZeal_70 MiaZeal_71 MiaZeal_72 MiaZeal_73 MiaZeal_74 MiaZeal_75 MiaZeal_76 MiaZeal_77 MiaZeal_78 MiaZeal_79 MiaZeal_80 MiaZeal_81 MiaZeal_82 MiaZeal_83 MiaZeal_84 MiaZeal_85 MiaZeal_86 (excise) MiaZeal_87 (tyrosine integrase) MiaZeal_88 MiaZeal_89 MiaZeal_90 MiaZeal_91 MiaZeal_92 MiaZeal_93 (helix-turn-helix DNA binding protein) MiaZeal_94 MiaZeal_95 MiaZeal_96 (esterase) MiaZeal_97 MiaZeal_98 MiaZeal_99 MiaZeal_100 MiaZeal_101 MiaZeal_102 MiaZeal_103 MiaZeal_104 MiaZeal_105 MiaZeal_106 MiaZeal_107 MiaZeal_108 MiaZeal_109 MiaZeal_110 MiaZeal_111 MiaZeal_112 (RecB-like exonuclease) MiaZeal_113 MiaZeal_114 MiaZeal_115 MiaZeal_116 (HNH endonuclease) MiaZeal_117 (DNA methyltransferase) MiaZeal_118 MiaZeal_119 MiaZeal_120 MiaZeal_121 MiaZeal_122 MiaZeal_123 MiaZeal_124 MiaZeal_125 (polynucleotide kinase) MiaZeal_126 MiaZeal_127 (endonuclease VII) MiaZeal_128 MiaZeal_129 (WhiB family transcription factor) MiaZeal_130 (helix-turn-helix DNA binding protein) MiaZeal_131 MiaZeal_132 MiaZeal_133 MiaZeal_134 MiaZeal_135 MiaZeal_136 MiaZeal_137 (DNA primase/polymerase) MiaZeal_138 MiaZeal_139 MiaZeal_140 MiaZeal_141 MiaZeal_142 MiaZeal_143 (helix-turn-helix DNA binding protein) MiaZeal_144 MiaZeal_145 MiaZeal_146 MiaZeal_147 (DNA primase/helicase) MiaZeal_148 MiaZeal_149 MiaZeal_150 MiaZeal_151 MiaZeal_152 MiaZeal_153 MiaZeal_154 MiaZeal_155 (RNA ligase) MiaZeal_156 (ClpP-like protease) MiaZeal_157 (DnaQ-like DNA polymerase III subunit) MiaZeal_158 MiaZeal_159 MiaZeal_160 MiaZeal_161 MiaZeal_162 MiaZeal_163 MiaZeal_164 MiaZeal_165 (PAPS reductase-like protein) MiaZeal_166 MiaZeal_167 MiaZeal_168 (nucleotide pyrophosphohydrolase) MiaZeal_169 MiaZeal_170 MiaZeal_171 MiaZeal_172 MiaZeal_173 MiaZeal_174 MiaZeal_175 MiaZeal_176 MiaZeal_177 MiaZeal_178 MiaZeal_179 MiaZeal_180 MiaZeal_181 MiaZeal_182 MiaZeal_183 MiaZeal_184 MiaZeal_185 MiaZeal_186 MiaZeal_187 — tRNA (tRNA gly (tcc)) MiaZeal_188 MiaZeal_189 MiaZeal_190 MiaZeal_191 — tRNA (TRNA Tyr (gta)) MiaZeal_192 MiaZeal_193 MiaZeal_194 MiaZeal_195 MiaZeal_196 MiaZeal_197 MiaZeal_198 MiaZeal_199 MiaZeal_200 MiaZeal_201 MiaZeal_202 MiaZeal_203 MiaZeal_204 MiaZeal_205 MiaZeal_206 (FtsK-like DNA translocase) MiaZeal_207 MiaZeal_208 MiaZeal_209 MiaZeal_210 MiaZeal_211 MiaZeal_212 MiaZeal_213 (Ku-like dsDNA break-binding protein) MiaZeal_214 MiaZeal_215 MiaZeal_216 MiaZeal_217 MiaZeal_218 MiaZeal_219 MiaZeal_220 MiaZeal_221 MiaZeal_222 MiaZeal_223 MiaZeal_224 MiaZeal_225 MiaZeal_226 MiaZeal_227 MiaZeal_228 MiaZeal_229 MiaZeal_230 MiaZeal_231 MiaZeal_232 MiaZeal_233 MiaZeal_234 MiaZeal_235 MiaZeal_236 MiaZeal_237 MiaZeal_238 MiaZeal_239 MiaZeal_240 MiaZeal_241 MiaZeal_242 MiaZeal_243 MiaZeal_244 MiaZeal_245 MiaZeal_246 MiaZeal_247 MiaZeal_248 MiaZeal_249 MiaZeal_250 MiaZeal_251 MiaZeal_252
Publication Info
Uploaded to GenBank?	Yes
GenBank Accession	KM925136
Refseq Number	None yet
Published in Paper	Pope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Archiving Info
Archiving status	Archived

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