Gordonia phage Nubi
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Detailed Information for Phage Nubi
Discovery Information
Isolation HostGordonia terrae CAG3
Found ByNajeƩ Green
Year Found2017
Location FoundGreensboro, NC USA
Finding InstitutionNorth Carolina A&T State University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates36.084139 N, 79.775236 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedApr 23, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage788
Genome length (bp)58718
Character of genome endsCircularly Permuted
GC Content67.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDC
SubclusterDC1
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionNorth Carolina A&T State University
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes97
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Nubi_1
(helix-turn-helix DNA binding domain protein)

Nubi_2

Nubi_3

Nubi_4

Nubi_5
(terminase)

Nubi_6

Nubi_7

Nubi_8
(ASC-1 transcription coactivator)

Nubi_9

Nubi_10
(polynucleotide kinase)

Nubi_11

Nubi_12
(portal protein)

Nubi_13

Nubi_14
(capsid maturation protease and MuF-like fusion protein)

Nubi_15

Nubi_16
(capsid maturation protease)

Nubi_17
(RNA ligase)

Nubi_18

Nubi_19
(major capsid hexamer protein)

Nubi_20

Nubi_21

Nubi_22
(major tail protein)

Nubi_23
(head-to-tail adaptor)

Nubi_24

Nubi_25

Nubi_26

Nubi_27
(tail assembly chaperone)

Nubi_28
(tail assembly chaperone)

Nubi_29
(tape measure protein)

Nubi_30
(minor tail protein)

Nubi_31
(minor tail protein)

Nubi_32

Nubi_33
(minor tail protein)

Nubi_34

Nubi_35
(minor tail protein)

Nubi_36
(minor tail protein)

Nubi_37

Nubi_38

Nubi_39
(lysin A)

Nubi_40
(holin)

Nubi_41

Nubi_42

Nubi_43

Nubi_44
(lysin B)

Nubi_45
(serine integrase)

Nubi_46

Nubi_47
(tyrosine integrase)

Nubi_48
(immunity repressor)

Nubi_49
(helix-turn-helix DNA binding domain protein)

Nubi_50

Nubi_51

Nubi_52

Nubi_53

Nubi_54
(RecE-like exonuclease)

Nubi_55
(RecT-like ssDNA binding protein)

Nubi_56

Nubi_57

Nubi_58

Nubi_59

Nubi_60
(helix-turn-helix DNA binding domain protein)

Nubi_61
(helix-turn-helix DNA binding domain protein)

Nubi_62

Nubi_63
(RuvC-like resolvase)

Nubi_64

Nubi_65

Nubi_66

Nubi_67

Nubi_68

Nubi_69

Nubi_70

Nubi_71

Nubi_72
(nicotinate ribosyltransferase)

Nubi_73

Nubi_74

Nubi_75

Nubi_76

Nubi_77

Nubi_78

Nubi_79

Nubi_80

Nubi_81

Nubi_82

Nubi_83

Nubi_84
(DNA methylase)

Nubi_85

Nubi_86

Nubi_87

Nubi_88
(DnaJ-like chaperonin)

Nubi_89
(helix-turn-helix DNA binding domain protein)

Nubi_90

Nubi_91

Nubi_92

Nubi_93

Nubi_94

Nubi_95

Nubi_96

Nubi_97

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN010760
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 62
Pitt Freezer Box Grid# C12
Available Files
GenBank File for PhameratorDownload