Gordonia phage Nubi
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Detailed Information for Phage Nubi
Discovery Information
Isolation HostGordonia terrae CAG3
Found ByNajeƩ Green
Year Found2017
Location FoundGreensboro, NC USA
Finding InstitutionNorth Carolina A&T State University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates36.084139 N, 79.775236 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedApr 23, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage788
Genome length (bp)58718
Character of genome endsCircularly Permuted
GC Content67.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDC
SubclusterDC1
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionNorth Carolina A&T State University
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes97
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Nubi_1
(helix-turn-helix DNA binding domain protein)

Nubi_2

Nubi_3

Nubi_4

Nubi_5
(terminase)

Nubi_6

Nubi_7

Nubi_8
(ASC-1 transcription coactivator)

Nubi_9

Nubi_10
(polynucleotide kinase)

Nubi_11

Nubi_12
(portal protein)

Nubi_13

Nubi_14
(capsid maturation protease and MuF-like fusion protein)

Nubi_15

Nubi_16
(capsid maturation protease)

Nubi_17
(RNA ligase)

Nubi_18

Nubi_19
(major capsid hexamer protein)

Nubi_20

Nubi_21

Nubi_22
(major tail protein)

Nubi_23
(head-to-tail adaptor)

Nubi_24

Nubi_25

Nubi_26

Nubi_27
(tail assembly chaperone)

Nubi_28
(tail assembly chaperone)

Nubi_29
(tape measure protein)

Nubi_30
(minor tail protein)

Nubi_31
(minor tail protein)

Nubi_32

Nubi_33
(minor tail protein)

Nubi_34

Nubi_35
(minor tail protein)

Nubi_36
(minor tail protein)

Nubi_37

Nubi_38

Nubi_39
(lysin A)

Nubi_40
(holin)

Nubi_41

Nubi_42

Nubi_43

Nubi_44
(lysin B)

Nubi_45
(serine integrase)

Nubi_46

Nubi_47
(tyrosine integrase)

Nubi_48
(immunity repressor)

Nubi_49
(helix-turn-helix DNA binding domain protein)

Nubi_50

Nubi_51

Nubi_52

Nubi_53

Nubi_54
(RecE-like exonuclease)

Nubi_55
(RecT-like ssDNA binding protein)

Nubi_56

Nubi_57

Nubi_58

Nubi_59

Nubi_60
(helix-turn-helix DNA binding domain protein)

Nubi_61
(helix-turn-helix DNA binding domain protein)

Nubi_62

Nubi_63
(RuvC-like resolvase)

Nubi_64

Nubi_65

Nubi_66

Nubi_67

Nubi_68

Nubi_69

Nubi_70

Nubi_71

Nubi_72
(nicotinate ribosyltransferase)

Nubi_73

Nubi_74

Nubi_75

Nubi_76

Nubi_77

Nubi_78

Nubi_79

Nubi_80

Nubi_81

Nubi_82

Nubi_83

Nubi_84
(DNA methylase)

Nubi_85

Nubi_86

Nubi_87

Nubi_88
(DnaJ-like chaperonin)

Nubi_89
(helix-turn-helix DNA binding domain protein)

Nubi_90

Nubi_91

Nubi_92

Nubi_93

Nubi_94

Nubi_95

Nubi_96

Nubi_97

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN010760
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 62
Pitt Freezer Box Grid# C12
Available Files
GenBank File for PhameratorDownload