Microbacterium phage Pepe25
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage Pepe25
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224
Former namesElPepe
Found ByJuanly Gomez Perez
Year Found2020
Location FoundPhiladelphia, PA US
Finding InstitutionLa Salle University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates40.014556 N, 75.103786 W Map
Discovery NotesGarden mud. 5 g Soil taken from the backyard near dead plants. Previous location on a bucket near many other healthy plants.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 25, 2021
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage75
Genome length (bp)60998
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length202 bp
GC Content67.2%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEG
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionLa Salle University
Annotation StatusIn GenBank
Plaque NotesClear plaque morphology.
MorphotypeSiphoviridae
Number of Genes104
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

Pepe25_1

Pepe25_2

Pepe25_3

Pepe25_4
(histidine triad nucleotide binding protein)

Pepe25_5

Pepe25_6

Pepe25_7

Pepe25_8

Pepe25_9

Pepe25_10
(helix-turn-helix DNA binding domain protein)

Pepe25_11
(helix-turn-helix DNA binding domain protein)

Pepe25_12

Pepe25_13

Pepe25_14
(ribbon-helix-helix DNA binding domain protein)

Pepe25_15

Pepe25_16

Pepe25_17
(ribbon-helix-helix DNA binding domain protein)

Pepe25_18
(terminase)

Pepe25_19

Pepe25_20
(portal protein)

Pepe25_21
(capsid maturation protease)

Pepe25_22

Pepe25_23
(major capsid protein)

Pepe25_24

Pepe25_25

Pepe25_26
(major tail protein)

Pepe25_27

Pepe25_28
(phosphoesterase)

Pepe25_29
(head-to-tail adaptor)

Pepe25_30

Pepe25_31

Pepe25_32
(tail assembly chaperone)

Pepe25_33
(tail assembly chaperone)

Pepe25_34
(tape measure protein)

Pepe25_35
(minor tail protein)

Pepe25_36
(minor tail protein)

Pepe25_37
(minor tail protein)

Pepe25_38

Pepe25_39

Pepe25_40

Pepe25_41

Pepe25_42

Pepe25_43

Pepe25_44
(endolysin)

Pepe25_45

Pepe25_46

Pepe25_47

Pepe25_48

Pepe25_49

Pepe25_50

Pepe25_51

Pepe25_52
(HNH endonuclease)

Pepe25_53

Pepe25_54

Pepe25_55

Pepe25_56

Pepe25_57

Pepe25_58
(DNA recombinase)

Pepe25_59
(HNH endonuclease)

Pepe25_60
(RuvC-like resolvase)

Pepe25_61

Pepe25_62
(ssDNA binding protein)

Pepe25_63

Pepe25_64

Pepe25_65

Pepe25_66

Pepe25_67

Pepe25_68

Pepe25_69

Pepe25_70

Pepe25_71
(DNA primase)

Pepe25_72

Pepe25_73

Pepe25_74

Pepe25_75

Pepe25_76

Pepe25_77

Pepe25_78

Pepe25_79

Pepe25_80

Pepe25_81

Pepe25_82
(MazG-like nucleotide pyrophosphohydrolase)

Pepe25_83

Pepe25_84

Pepe25_85

Pepe25_86

Pepe25_87

Pepe25_88

Pepe25_89

Pepe25_90

Pepe25_91

Pepe25_92

Pepe25_93

Pepe25_94

Pepe25_95

Pepe25_96

Pepe25_97

Pepe25_98

Pepe25_99

Pepe25_100

Pepe25_101

Pepe25_102

Pepe25_103

Pepe25_104

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOK040787
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
GenBank File for PhameratorDownload