The Actinobacteriophage Database

Add or modify phage thumbnail images to appear at the top of this page.

Know something about this phage that we don't? Modify its data.

Detailed Information for Phage Pine5
Discovery Information
Isolation Host	Rhodococcus equi 05-305
Found By	E.J. Summer et al
Year Found	2010
Location Found	Unavailable
Program	Unavailable
From enriched soil sample?	Yes
Isolation Temperature	Not entered
GPS Coordinates	30.618994 N, 96.335416 W Map
Sequencing Information
Sequencing Complete?	Yes
Date Sequencing Completed	Jan 13, 2011
Shotgun Sequencing Method	454
Approximate Shotgun Coverage	13
Genome length (bp)	59231
Character of genome ends	Circularly Permuted
GC Content	67.1%
Fasta file available?	Yes: Download fasta file
Characterization
Cluster	Singleton
Subcluster	--
Cluster Life Cycle	Unknown
Other Cluster Members	Click to View ArV2 Attoomi Barebow Cantare ChewyVIII Chymera CyranoPS DocB7 DrWorm DS6A E3 Elener EmiRose Eyre Finch Finkle Footloose FuzzBuster GAL1 Gilgamesh GMA1 GMA4 Gudmit Ibantik IdentityCrisis Jace JeanGrey Juicebox Kithara Kromp Kumao LilSpotty LuckyBarnes Magritte Min1 MooMoo mu16 OnionKnight P3MA PensacolaC28 phiAsp2 phiSAV Phroglets Pine5 Ponzi PSonyx pZL12 REQ2 REQ3 Reynauld RomansRevenge Root RRH1 Samy Shambre1 Shocker Shrew Sleepyhead Spartoi StAugustine Success Sunfish TinyDot TJE1 Tonitrus TPA2 TPA4 Trogglehumper TurkishDelight ValentiniPuff VanLee Whack Wollypog Yappy
Annotating Institution	Unknown or unassigned
Annotation Status	In GenBank
Number of Genes	84
Number of tRNAs	0
Number of tmRNAs	0
Has been Phamerated?	Yes
Gene List	Click to View Pine5_01 (TerL) Pine5_02 (PAPS reductase) Pine5_03 Pine5_04 Pine5_05 Pine5_06 Pine5_07 Pine5_08 Pine5_09 Pine5_10 Pine5_11 Pine5_12 Pine5_13 Pine5_14 Pine5_15 Pine5_16 Pine5_17 Pine5_18 Pine5_19 Pine5_20 Pine5_21 Pine5_22 Pine5_23 Pine5_24 Pine5_25 Pine5_26 Pine5_27 (tape measure protein) Pine5_28 Pine5_29 Pine5_30 Pine5_31 Pine5_32 Pine5_33 Pine5_34 Pine5_35 Pine5_36 Pine5_37 Pine5_38 Pine5_39 Pine5_40 (LysA) Pine5_41 Pine5_42 Pine5_43 Pine5_44 Pine5_45 Pine5_46 Pine5_47 Pine5_48 Pine5_49 Pine5_50 Pine5_51 Pine5_52 Pine5_53 Pine5_54 Pine5_55 Pine5_56 Pine5_57 Pine5_58 Pine5_59 Pine5_60 Pine5_61 Pine5_62 Pine5_63 Pine5_64 Pine5_65 Pine5_66 Pine5_67 Pine5_68 Pine5_69 Pine5_70 Pine5_71 Pine5_72 Pine5_73 Pine5_74 Pine5_75 Pine5_76 Pine5_77 Pine5_78 Pine5_79 Pine5_80 Pine5_81 Pine5_82 Pine5_83 Pine5_84
Publication Info
Uploaded to GenBank?	Yes
GenBank Accession	GU580943
Refseq Number	NC_023722
Published in Paper	E. J. Summer et al 2011, Applied and Environmental Microbiology: Genomic and Functional Analyses of Rhodococcus equi Phages ReqiPepy6, ReqiPoco6, ReqiPine5, and ReqiDocB7
Archiving Info
Archiving status	Ignore

Click to View

Click to View