The Actinobacteriophage Database

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Detailed Information for Phage Quammi
Discovery Information
Isolation Host	Microbacterium foliorum NRRL B-24224
Found By	Samantha Rustia and Quincy Neal
Year Found	2018
Location Found	Spokane, WA USA
Finding Institution	Gonzaga University
Program	Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?	Yes
Isolation Temperature	22°C
GPS Coordinates	47.667333 N, 117.402917 W Map
Discovery Notes	Room Temperature
Sequencing Information
Sequencing Complete?	Yes
Date Sequencing Completed	Jan 29, 2020
Sequencing Facility	Pittsburgh Bacteriophage Institute
Shotgun Sequencing Method	Illumina Sequencing
Approximate Shotgun Coverage	1475
Genome length (bp)	61903
Character of genome ends	Direct Terminal Repeat
Direct Terminal Repeat Length	203 bp
GC Content	66.9%
Fasta file available?	Yes: Download fasta file
Characterization
Cluster	EG
Subcluster	--
Cluster Life Cycle	Lytic
Other Cluster Members	Click to View Altheas AluminumJesus BabyDotz BirdInFrench Blab CandC Casend DonaldDuck EverythinBagel Fizzles FrankDeliGuy Fransoyer Fregley Gazebo Grassboy Hyperion Jehoshaphat Judebell Kelcole Kyva Llemily Lonelysoil Marcie Mashley MorillMayhem Namago Nike OneinaGillian Pepe25 Phabia Phinky Quammi RobinRose Romm Rowlf RubyRalph Rudy SadLad SallyK Sillytadpoles Squash Statler StrawberryJamm Teehee Tempo Tissue Viceroy Wayne3 Wheelie Wilca Zagie Zhafia
Annotating Institution	Gonzaga University
Annotation Status	In GenBank
Morphotype	Siphoviridae
Number of Genes	107
Number of tRNAs	0
Number of tmRNAs	0
Has been Phamerated?	Yes
Gene List	Click to View Quammi_1 Quammi_2 Quammi_3 Quammi_4 Quammi_5 Quammi_6 (histidine triad nucleotide binding protein) Quammi_7 (PnuC-like nicotinamide riboside transporter) Quammi_8 (DprA-like DNA processing chain A) Quammi_9 Quammi_10 Quammi_11 (helix-turn-helix DNA binding domain protein) Quammi_12 (helix-turn-helix DNA binding domain protein) Quammi_13 (ribbon-helix-helix DNA binding domain protein) Quammi_14 (helix-turn-helix DNA binding domain protein) Quammi_15 Quammi_16 Quammi_17 (ribbon-helix-helix DNA binding domain protein) Quammi_18 (terminase) Quammi_19 Quammi_20 (portal protein) Quammi_21 (capsid maturation protease and MuF-like fusion protein) Quammi_22 Quammi_23 (major capsid hexamer protein) Quammi_24 Quammi_25 Quammi_26 (major tail protein) Quammi_27 Quammi_28 (phosphoesterase) Quammi_29 (head-to-tail adaptor) Quammi_30 Quammi_31 Quammi_32 (tail assembly chaperone) Quammi_33 (tail assembly chaperone) Quammi_34 (tape measure protein) Quammi_35 (minor tail protein) Quammi_36 (minor tail protein) Quammi_37 (minor tail protein) Quammi_38 Quammi_39 Quammi_40 Quammi_41 Quammi_42 Quammi_43 (endolysin) Quammi_44 Quammi_45 Quammi_46 (DnaJ-like chaperonin) Quammi_47 Quammi_48 (Cas4 family exonuclease) Quammi_49 (DNA recombinase) Quammi_50 (HNH endonuclease) Quammi_51 (RuvC-like resolvase) Quammi_52 Quammi_53 Quammi_54 (MazG-like nucleotide pyrophosphohydrolase) Quammi_55 (ssDNA binding protein) Quammi_56 Quammi_57 Quammi_58 Quammi_59 Quammi_60 Quammi_61 Quammi_62 Quammi_63 Quammi_64 Quammi_65 Quammi_66 Quammi_67 Quammi_68 (DNA primase/helicase) Quammi_69 Quammi_70 (ribbon-helix-helix DNA binding domain protein) Quammi_71 Quammi_72 Quammi_73 Quammi_74 Quammi_75 Quammi_76 Quammi_77 Quammi_78 Quammi_79 Quammi_80 Quammi_81 Quammi_82 Quammi_83 Quammi_84 Quammi_85 Quammi_86 Quammi_87 Quammi_88 Quammi_89 Quammi_90 Quammi_91 Quammi_92 Quammi_93 Quammi_94 Quammi_95 Quammi_96 Quammi_97 Quammi_98 Quammi_99 Quammi_100 Quammi_101 Quammi_102 Quammi_103 Quammi_104 Quammi_105 Quammi_106 Quammi_107
Submitted Minimal DNA Master File	Download
Publication Info
Uploaded to GenBank?	Yes
GenBank Accession	MW712728
Refseq Number	None yet
Published in Paper	Hoag et al 2022, Microbiology Resource Announcements: Genome Sequences of Microbacterium foliorum Bacteriophages StrawberryJamm, Quammi, Teehee, and Casend
Archiving Info
Archiving status	Archived
Pitt Freezer Box#	95
Pitt Freezer Box Grid#	C5
Available Files
EM Picture	Download
GenBank File for Phamerator	Download

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