Microbacterium phage Quenya
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Detailed Information for Phage Quenya
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224
Found ByCristina Croci
Year Found2019
Location FoundPlano, TX United States
Finding InstitutionCollin College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates33.018214 N, 96.701198 W Map
Discovery NotesSample was collected from the top 1 inch layer of enriched, dry soil at 1535 hours. Temperature at the time was 35C and the air was dry.
Naming NotesLord of the Rings
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 21, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1125
Genome length (bp)41876
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceACTCCCGGCA
GC Content69.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEB
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionCollin College
Annotation StatusIn GenBank
Plaque NotesLytic
Number of Genes67
Number of tRNAs2
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Quenya_1 — tRNA
(tRNA-Tyr(gta))

Quenya_2

Quenya_3
(terminase small subunit)

Quenya_4
(terminase large subunit)

Quenya_5
(portal and MuF-like fusion protein)

Quenya_6
(capsid maturation protease)

Quenya_7
(major capsid protein)

Quenya_8

Quenya_9
(head-to-tail adaptor)

Quenya_10
(head-to-tail stopper)

Quenya_11

Quenya_12
(tail terminator)

Quenya_13
(major tail protein)

Quenya_14
(tail assembly chaperone)

Quenya_15
(tail assembly chaperone)

Quenya_16
(tape measure protein)

Quenya_17
(minor tail protein)

Quenya_18
(minor tail protein)

Quenya_19
(minor tail protein)

Quenya_20
(minor tail protein)

Quenya_21
(endolysin)

Quenya_22

Quenya_23

Quenya_24

Quenya_25

Quenya_26

Quenya_27
(exonuclease)

Quenya_28

Quenya_29

Quenya_30
(MazG-like nucleotide pyrophosphohydrolase)

Quenya_31
(thymidylate kinase)

Quenya_32
(recombination directionality factor)

Quenya_33

Quenya_34

Quenya_35
(thioredoxin)

Quenya_36
(holliday junction resolvase)

Quenya_37

Quenya_38

Quenya_39

Quenya_40
(DNA primase/helicase)

Quenya_41
(endonuclease VII)

Quenya_42
(DNA polymerase I)

Quenya_43

Quenya_44

Quenya_45
(RNA polymerase sigma factor)

Quenya_46

Quenya_47
(SprT-like protease)

Quenya_48
(ParB-like nuclease domain protein)

Quenya_49

Quenya_50

Quenya_51

Quenya_52

Quenya_53
(HNH endonuclease)

Quenya_54

Quenya_55

Quenya_56

Quenya_57

Quenya_58
(dihydrofolate reductase)

Quenya_59

Quenya_60

Quenya_61
(thymidylate synthase)

Quenya_62

Quenya_63

Quenya_64

Quenya_65

Quenya_66

Quenya_67

Quenya_68 — tRNA
(tRNA-Gln(ctg))

Quenya_69
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMT889365
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 105
Pitt Freezer Box Grid# D2
Available Files
Plaque PictureDownload
GenBank File for PhameratorDownload