Detailed Information for Phage SanaSana |
Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Joseph Sabbagh |
Year Found | 2022 |
Location Found | Port Saint Lucie, FL United States |
Finding Institution | Indian River State College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 28°C |
GPS Coordinates | 27.270556 N, 80.346389 W Map |
Discovery Notes | Sample was found in a compost bin. The bin was comprised of paper, cardboard, fruits, vegetable, egg shells, and coffee grounds. The sample was both dense and had trace amounts of liquid. The bin faces the sun during during about half of the day. |
Naming Notes | The name was chosen from an old rhyme my mother used to say when I got hurt as a child. Make it both nostalgic as well as a reminder that with time things heal. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 5, 2023 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 208 |
Genome length (bp) | 42006 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | TCTCCCGGCA |
GC Content | 69.2% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EB |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | Indian River State College |
Annotation Status | In GenBank |
Plaque Notes | The plaques were of varying size, mostly being comprised of medium to larger plaques. |
Number of Genes | 68 |
Number of tRNAs | 3 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | PP059646 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
169 |
Pitt Freezer Box Grid# |
C12 |
Available Files |
Plaque Picture | Download |
GenBank File for Phamerator | Download |