Microbacterium phage SarBear
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage SarBear
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224
Found ByAndrew Owens
Year Found2021
Location FoundProvo, UT USA
Finding InstitutionBrigham Young University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature14°C
GPS Coordinates40.243974 N, 111.650993 W Map
Discovery NotesThe phage was discovered on a brisk fall morning from a soil sample on BYU campus in Provo, UT.
Naming NotesThis name is part Sarah part Bear. Sarah is my wife's name and the overall name is a nickname.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJun 13, 2023
Sequencing FacilityBYU DNA Sequencing Center
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage642
Genome length (bp)41611
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTCTCCCGGCA
GC Content66.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEB
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionBrigham Young University
Annotation StatusIn GenBank
Number of Genes70
Number of tRNAs3
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

SarBear_1

SarBear_2
(terminase small subunit)

SarBear_3
(terminase large subunit)

SarBear_4
(portal protein)

SarBear_5
(capsid maturation protease)

SarBear_6
(major capsid protein)

SarBear_7

SarBear_8
(head-to-tail adaptor)

SarBear_9
(head-to-tail stopper)

SarBear_10

SarBear_11
(tail terminator)

SarBear_12
(major tail protein)

SarBear_13
(tail assembly chaperone)

SarBear_14
(tail assembly chaperone)

SarBear_15

SarBear_16
(tape measure protein)

SarBear_17
(minor tail protein)

SarBear_18
(minor tail protein)

SarBear_19

SarBear_20
(minor tail protein)

SarBear_21
(minor tail protein)

SarBear_22
(lysin A)

SarBear_23

SarBear_24

SarBear_25

SarBear_26

SarBear_27

SarBear_28

SarBear_29

SarBear_30

SarBear_31
(MazG-like nucleotide pyrophosphohydrolase)

SarBear_32
(thymidylate kinase)

SarBear_33
(recombination directionality factor)

SarBear_34

SarBear_35

SarBear_36
(NrdH-like glutaredoxin)

SarBear_37
(Holliday junction resolvase)

SarBear_38

SarBear_39

SarBear_40

SarBear_41
(DNA primase/helicase)

SarBear_42
(DNA polymerase I)

SarBear_43

SarBear_44

SarBear_45
(DNA binding protein)

SarBear_46

SarBear_47

SarBear_48

SarBear_49
(ParB-like nuclease domain protein)

SarBear_50

SarBear_51

SarBear_52
(HNH endonuclease)

SarBear_53

SarBear_54

SarBear_55

SarBear_56

SarBear_57
(dihydrofolate reductase)

SarBear_58

SarBear_59
(thymidylate synthase)

SarBear_60

SarBear_61

SarBear_62

SarBear_63

SarBear_64

SarBear_65

SarBear_66

SarBear_67

SarBear_68

SarBear_69 — tRNA
(tRNA-Asn(gtt))

SarBear_70 — tRNA
(tRNA-Gln(ctg))

SarBear_71 — tRNA
(tRNA-Lys(ctt))

SarBear_72
(HNH endonuclease)

SarBear_73

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPP537964
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
GenBank File for PhameratorDownload