Microbacterium phage Swervy
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Detailed Information for Phage Swervy
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224
Found ByKhaleah Williams
Year Found2020
Location FoundAston, PA United States
Finding InstitutionNeumann University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates39.8657 N, 75.4279 W Map
Discovery NotesThe sample was obtained at 1:02 pm at an outside temperature of 70 F.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 14, 2021
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage325
Genome length (bp)41510
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTCTCCCGGCA
GC Content66.7%
Sequencing Notesat position 24157 bp 40% of reads contain a G instead of consensus T
at position 28445 bp 30% of reads contain a G instead of consensus T
Fasta file available?Yes: Download fasta file
Characterization
ClusterEB
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionNeumann University
Annotation StatusIn GenBank
Plaque NotesDonut cloudy
MorphotypeSiphoviridae
Number of Genes70
Number of tRNAs1
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Swervy_1

Swervy_2
(terminase small subunit)

Swervy_3
(terminase large subunit)

Swervy_4
(portal and MuF-like fusion protein)

Swervy_5
(capsid maturation protease)

Swervy_6
(major capsid protein)

Swervy_7

Swervy_8
(head-to-tail adaptor)

Swervy_9
(head-to-tail stopper)

Swervy_10

Swervy_11
(tail terminator)

Swervy_12
(major tail protein)

Swervy_13
(tail assembly chaperone)

Swervy_14
(tail assembly chaperone)

Swervy_15

Swervy_16
(tape measure protein)

Swervy_17
(minor tail protein)

Swervy_18
(minor tail protein)

Swervy_19

Swervy_20
(minor tail protein)

Swervy_21
(minor tail protein)

Swervy_22
(endolysin)

Swervy_23

Swervy_24

Swervy_25

Swervy_26

Swervy_27

Swervy_28

Swervy_29
(Cas4 family exonuclease)

Swervy_30

Swervy_31

Swervy_32
(MazG-like nucleotide pyrophosphohydrolase)

Swervy_33
(thymidylate kinase)

Swervy_34
(recombination directionality factor)

Swervy_35

Swervy_36

Swervy_37
(NrdH-like glutaredoxin)

Swervy_38
(holliday junction resolvase)

Swervy_39

Swervy_40

Swervy_41

Swervy_42
(DNA primase/helicase)

Swervy_43
(DNA polymerase I)

Swervy_44

Swervy_45

Swervy_46
(DNA binding protein)

Swervy_47

Swervy_48

Swervy_49

Swervy_50
(ParB-like nuclease domain protein)

Swervy_51

Swervy_52

Swervy_53
(HNH endonuclease)

Swervy_54

Swervy_55

Swervy_56

Swervy_57

Swervy_58
(dihydrofolate reductase)

Swervy_59

Swervy_60
(thymidylate synthase)

Swervy_61

Swervy_62

Swervy_63

Swervy_64

Swervy_65

Swervy_66

Swervy_67

Swervy_68

Swervy_69 — tRNA
(tRNA-Asn(gtt). detected by both Aragorn v1.2.41 and tRNAscan v2.0, infernal score 55.5.)

Swervy_70
(HNH endonuclease)

Swervy_71

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMZ747513
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 2.58 x 10^9
Pitt Freezer Box# 121
Pitt Freezer Box Grid# A4
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
GenBank File for PhameratorDownload