| Detailed Information for Phage Wilca | |
| Discovery Information | |
| Isolation Host | Microbacterium foliorum NRRL B-24224 |
| Found By | Gianna, Sam, Siddharth, Wilca |
| Year Found | 2023 |
| Location Found | Amherst, MA United States of America |
| Finding Institution | University of Massachusetts Amherst |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 30°C |
| GPS Coordinates | 42.390379 N, 72.526007 W Map |
| Discovery Notes | This phage was found by the campus pond, in the middle of campus. It was found in the dirt around the pond. |
| Naming Notes | We couldn't figure out what name we wanted to name our phage, so we were stuck. We were looking at the rules and ruling out names we could and couldn't have. One of the members of our group's name is Wilca and we thought it would be best if we named it that so it is easy to remember. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Sep 7, 2023 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 138 |
| Genome length (bp) | 62073 |
| Character of genome ends | Direct Terminal Repeat |
| Direct Terminal Repeat Length | 202 bp |
| GC Content | 67.2% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | EG |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
Click to ViewAltheas AluminumJesus BabyDotz BirdInFrench Blab CandC Casend DonaldDuck EverythinBagel Fizzles FrankDeliGuy Fransoyer Fregley Gazebo Grassboy Hyperion Jehoshaphat Judebell Kelcole Kyva Llemily Lonelysoil Marcie Mashley MorillMayhem Namago Nike OneinaGillian Pepe25 Phabia Phinky Quammi RobinRose Romm Rowlf RubyRalph Rudy SadLad SallyK Sillytadpoles Squash Statler StrawberryJamm Teehee Tempo Tissue Viceroy Wayne3 Wheelie Wilca Zagie Zhafia |
| Annotating Institution | University of Massachusetts Amherst |
| Annotation Status | Awaiting_QC |
| Plaque Notes | The phage Wilca was observed to have a small and circular morphology with clear appearance, measuring 1 mm in size. Its plaque exhibited well-defined edges without any noticeable bullseye or halo formation. The phage formed another morphology, which was circular, small, with a bullseye. |
| Morphotype | Siphoviridae |
| Number of Genes | 105 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewWilca_1 Wilca_2 Wilca_3 Wilca_4 Wilca_5 Wilca_6 Wilca_7 Wilca_8 Wilca_9 Wilca_10 Wilca_11 Wilca_12 Wilca_13 Wilca_14 Wilca_15 Wilca_16 Wilca_17 Wilca_18 Wilca_19 Wilca_20 Wilca_21 Wilca_22 Wilca_23 Wilca_24 Wilca_25 Wilca_26 Wilca_27 Wilca_28 Wilca_29 Wilca_30 Wilca_31 Wilca_32 Wilca_33 Wilca_34 Wilca_35 Wilca_36 Wilca_37 Wilca_38 Wilca_39 Wilca_40 Wilca_41 Wilca_42 Wilca_43 Wilca_44 Wilca_45 Wilca_46 Wilca_47 Wilca_48 Wilca_49 Wilca_50 Wilca_51 Wilca_52 Wilca_53 Wilca_54 Wilca_55 Wilca_56 Wilca_57 Wilca_58 Wilca_59 Wilca_60 Wilca_61 Wilca_62 Wilca_63 Wilca_64 Wilca_65 Wilca_66 Wilca_67 Wilca_68 Wilca_69 Wilca_70 Wilca_71 Wilca_72 Wilca_73 Wilca_74 Wilca_75 Wilca_76 Wilca_77 Wilca_78 Wilca_79 Wilca_80 Wilca_81 Wilca_82 Wilca_83 Wilca_84 Wilca_85 Wilca_86 Wilca_87 Wilca_88 Wilca_89 Wilca_90 Wilca_91 Wilca_92 Wilca_93 Wilca_94 Wilca_95 Wilca_96 Wilca_97 Wilca_98 Wilca_99 Wilca_100 Wilca_101 Wilca_102 Wilca_103 Wilca_104 Wilca_105 |
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 182 |
| Pitt Freezer Box Grid# | A3 |