| Detailed Information for Phage CupcakePrincess |
| Discovery Information |
| Isolation Host | Microbacterium foliorum NRRL B-24224 |
| Found By | Tayseer Abuelyaman |
| Year Found | 2024 |
| Location Found | Charlotte, NC United States |
| Finding Institution | Queens University of Charlotte |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 35.2361 N, 80.649268 W Map |
| Discovery Notes | I found it in my front yard. The soil was a bit moist and dark in color with little to no clay. |
| Naming Notes | No real reason, we just thought it was cute and funny. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Dec 26, 2024 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina NextSeq 1000 |
| Read Type | Single-end reads |
| Read Length | 100 bp |
| Approximate Shotgun Coverage | 2975 |
| Genome length (bp) | 41714 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | TCTCCCGGCA |
| GC Content | 66.7% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | EB |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Queens University of Charlotte |
| Annotation Status | QC Complete |
| Morphotype | Siphoviridae |
| Number of Genes | 70 |
| Number of tRNAs | 2 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| SEA Lysate Titer |
1.7x10^9 pfu/ml |
| Pitt Freezer Box# |
197 |
| Pitt Freezer Box Grid# |
E9 |
| Available Files |
| GenBank File for Phamerator | Download |