Detailed Information for Phage Lilo27 | |
Discovery Information | |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Valentina Paola Maccari Cancho |
Year Found | 2024 |
Location Found | Rosario, Argentina |
Finding Institution | Universidad Nacional de Rosario |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 33.95951 S, 60.64283 W Map |
Discovery Notes | This phage was isolated from a dry surface soil sample in a park in Rosario. |
Naming Notes | I named my phage after my cat, "Lilo". And "27" because it is my birthday number. |
Sequencing Information | |
Sequencing Complete? | Yes |
Date Sequencing Completed | Apr 1, 2025 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Sequencer Used | Illumina NextSeq 1000 |
Read Type | Single-end reads |
Read Length | 100 bp |
Approximate Shotgun Coverage | 2141 |
Genome length (bp) | 41563 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | TCTCCCGGCA |
GC Content | 66.7% |
Fasta file available? | Yes: Download fasta file |
Characterization | |
Cluster | EB |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
Click to ViewAbigail Akino08 Albedo Albright AnnaLie Armstrong Arroyo AvGardian Avocadoman BabyDaisy BabyYoda Bachaco BAjuniper BelmontSKP Bengal Bernstein Brahms BubbaBear Buldak Burritobowl Cashington Celaena ChiliPepper Clayda5 CliffHanger Coltrane CroZenni CupcakePrincess DickRichards Didgeridoo DirtyBubble Dismas Doobus Eden Elva Eula Finalfrontier FlameThrower Franklin22 Gack Icarian IndyLu Jabb Johnathan Jovita Kate33 Katzastrophic Kenzers Kieran Lahqtemish Lilo27 LimaBean Loviatar Lynlen Milomuff MsUbiquitous Nicky22 Olliecat PastaFagioli PhigPhack Phisb QMacho Quenya Rollins Rona SanaSana SansAfet SarBear Sharkboy Shayna Skylord Slay Softsoap Solea Squircle Stoor Stromboli SunnyD Swervy Teagster TukTuk Vitas WalkingDead |
Annotating Institution | Universidad Nacional de Rosario |
Annotation Status | Being Annotated (Expected completion by 8/1/2025) |
Morphotype | Siphoviridae |
Number of Genes | 71 |
Number of tRNAs | 1 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
Click to ViewLilo27_1 Lilo27_2 Lilo27_3 Lilo27_4 Lilo27_5 Lilo27_6 Lilo27_7 Lilo27_8 Lilo27_9 Lilo27_10 Lilo27_11 Lilo27_12 Lilo27_13 Lilo27_14 Lilo27_15 Lilo27_16 Lilo27_17 Lilo27_18 Lilo27_19 Lilo27_20 Lilo27_21 Lilo27_22 Lilo27_23 Lilo27_24 Lilo27_25 Lilo27_26 Lilo27_27 Lilo27_28 Lilo27_29 Lilo27_30 Lilo27_31 Lilo27_32 Lilo27_33 Lilo27_34 Lilo27_35 Lilo27_36 Lilo27_37 Lilo27_38 Lilo27_39 Lilo27_40 Lilo27_41 Lilo27_42 Lilo27_43 Lilo27_44 Lilo27_45 Lilo27_46 Lilo27_47 Lilo27_48 Lilo27_49 Lilo27_50 Lilo27_51 Lilo27_52 Lilo27_53 Lilo27_54 Lilo27_55 Lilo27_56 Lilo27_57 Lilo27_58 Lilo27_59 Lilo27_60 Lilo27_61 Lilo27_62 Lilo27_63 Lilo27_64 Lilo27_65 Lilo27_66 Lilo27_67 Lilo27_68 Lilo27_69 Lilo27_70 — tRNA Lilo27_71 Lilo27_72 |
Publication Info | |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info | |
Archiving status | Not in Pitt Archives |