Microbacterium phage MsUbiquitous
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage MsUbiquitous
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224
Found ByTayseer Abuelyaman
Year Found2024
Location FoundCharlotte, NC US
Finding InstitutionQueens University of Charlotte
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates35.2361 N, 80.649268 W Map
Discovery NotesI found it in my front yard. the soil was a bit moist and dark in color with little to no clay.
Naming NotesI just like the word.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 26, 2024
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Sequencer UsedIllumina NextSeq 1000
Read TypeSingle-end reads
Read Length100 bp
Approximate Shotgun Coverage7807
Genome length (bp)41714
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTCTCCCGGCA
GC Content66.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEB
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionQueens University of Charlotte
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes70
Number of tRNAs2
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

MsUbiquitous_1

MsUbiquitous_2
(terminase, small subunit)

MsUbiquitous_3
(terminase, large subunit)

MsUbiquitous_4
(portal protein)

MsUbiquitous_5
(capsid maturation protease)

MsUbiquitous_6
(major capsid protein)

MsUbiquitous_7

MsUbiquitous_8
(head-to-tail adaptor)

MsUbiquitous_9
(head-to-tail stopper)

MsUbiquitous_10

MsUbiquitous_11
(tail terminator)

MsUbiquitous_12
(major tail protein)

MsUbiquitous_13
(tail assemby chaperone)

MsUbiquitous_14
(tail assembly chaperone)

MsUbiquitous_15

MsUbiquitous_16
(tape measure protein)

MsUbiquitous_17
(minor tail protein)

MsUbiquitous_18
(minor tail protein)

MsUbiquitous_19

MsUbiquitous_20
(minor tail protein)

MsUbiquitous_21
(minor tail protein)

MsUbiquitous_22
(endolysin)

MsUbiquitous_23

MsUbiquitous_24

MsUbiquitous_25

MsUbiquitous_26

MsUbiquitous_27

MsUbiquitous_28

MsUbiquitous_29
(Cas4 family exonuclease)

MsUbiquitous_30

MsUbiquitous_31

MsUbiquitous_32
(dUTPase)

MsUbiquitous_33
(thymidylate kinase)

MsUbiquitous_34
(recombination directionality factor)

MsUbiquitous_35

MsUbiquitous_36

MsUbiquitous_37
(NrdH-like glutaredoxin)

MsUbiquitous_38
(Holliday junction resolvase)

MsUbiquitous_39

MsUbiquitous_40

MsUbiquitous_41

MsUbiquitous_42
(DNA primase/helicase)

MsUbiquitous_43
(DNA polymerase I)

MsUbiquitous_44

MsUbiquitous_45

MsUbiquitous_46
(DNA binding protein)

MsUbiquitous_47

MsUbiquitous_48

MsUbiquitous_49
(ParB-like N-terminal domain)

MsUbiquitous_50

MsUbiquitous_51

MsUbiquitous_52
(HNH endonuclease)

MsUbiquitous_53

MsUbiquitous_54

MsUbiquitous_55

MsUbiquitous_56

MsUbiquitous_57
(dihydrofolate reductase)

MsUbiquitous_58

MsUbiquitous_59
(thymidylate synthase)

MsUbiquitous_60

MsUbiquitous_61

MsUbiquitous_62

MsUbiquitous_63

MsUbiquitous_64

MsUbiquitous_65

MsUbiquitous_66

MsUbiquitous_67

MsUbiquitous_68

MsUbiquitous_69 — tRNA
(tRNA-Asn(gtt))

MsUbiquitous_70 — tRNA
(tRNA-Lys(ctt))

MsUbiquitous_71
(HNH endonuclease)

MsUbiquitous_72

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPV940994
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 1.3x10^9 pfu/ml
Pitt Freezer Box# 197
Pitt Freezer Box Grid# E12
Available Files
GenBank File for PhameratorDownload