Detailed Information for Phage PhigPhack | |
Discovery Information | |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Medha Rudraraju, Sabrina Huang, Joyce Zheng |
Year Found | 2024 |
Location Found | philadelphia, PA United States |
Finding Institution | Drexel University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 39.954167 N, 75.187222 W Map |
Discovery Notes | The soil was collected near a building on Drexel University's campus, under a pile of leaves, and near large trees. The soil was moist and surrounded by weeds and plants. |
Naming Notes | The name PhigPhack is a spinoff of the word "big back," which refers to someone who likes to eat. |
Sequencing Information | |
Sequencing Complete? | Yes |
Date Sequencing Completed | Dec 26, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Sequencer Used | Illumina NextSeq 1000 |
Read Type | Single-end reads |
Read Length | 100 bp |
Approximate Shotgun Coverage | 10494 |
Genome length (bp) | 41582 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | TCTCCCGGCA |
GC Content | 66.7% |
Fasta file available? | Yes: Download fasta file |
Characterization | |
Cluster | EB |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
Click to ViewAbigail Akino08 Albedo Albright AnnaLie Armstrong Arroyo AvGardian Avocadoman BabyDaisy BabyYoda Bachaco BAjuniper BelmontSKP Bengal Bernstein Brahms BubbaBear Buldak Burritobowl Cashington Celaena ChiliPepper Clayda5 CliffHanger Coltrane CroZenni CupcakePrincess DickRichards Didgeridoo DirtyBubble Dismas Doobus Eden Elva Eula Finalfrontier FlameThrower Franklin22 Gack Icarian IndyLu Jabb Johnathan Jovita Kate33 Katzastrophic Kenzers Kieran Lahqtemish Lilo27 LimaBean Loviatar Lynlen Milomuff MsUbiquitous Nicky22 Olliecat PastaFagioli PhigPhack Phisb QMacho Quenya Rollins Rona SanaSana SansAfet SarBear Sharkboy Shayna Skylord Slay Softsoap Solea Squircle Stoor Stromboli SunnyD Swervy Teagster TukTuk Vitas WalkingDead |
Annotating Institution | Drexel University |
Annotation Status | Being Annotated (Expected completion by 5/1/2025) |
Plaque Notes | 1mm-2mm with halos, clear, |
Morphotype | Siphoviridae |
Number of Genes | 71 |
Number of tRNAs | 3 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
Click to ViewPhigPhack_1 PhigPhack_2 PhigPhack_3 PhigPhack_4 PhigPhack_5 PhigPhack_6 PhigPhack_7 PhigPhack_8 PhigPhack_9 PhigPhack_10 PhigPhack_11 PhigPhack_12 PhigPhack_13 PhigPhack_14 PhigPhack_15 PhigPhack_16 PhigPhack_17 PhigPhack_18 PhigPhack_19 PhigPhack_20 PhigPhack_21 PhigPhack_22 PhigPhack_23 PhigPhack_24 PhigPhack_25 PhigPhack_26 PhigPhack_27 PhigPhack_28 PhigPhack_29 PhigPhack_30 PhigPhack_31 PhigPhack_32 PhigPhack_33 PhigPhack_34 PhigPhack_35 PhigPhack_36 PhigPhack_37 PhigPhack_38 PhigPhack_39 PhigPhack_40 PhigPhack_41 PhigPhack_42 PhigPhack_43 PhigPhack_44 PhigPhack_45 PhigPhack_46 PhigPhack_47 PhigPhack_48 PhigPhack_49 PhigPhack_50 PhigPhack_51 PhigPhack_52 PhigPhack_53 PhigPhack_54 PhigPhack_55 PhigPhack_56 PhigPhack_57 PhigPhack_58 PhigPhack_59 PhigPhack_60 PhigPhack_61 PhigPhack_62 PhigPhack_63 PhigPhack_64 PhigPhack_65 PhigPhack_66 PhigPhack_67 PhigPhack_68 PhigPhack_69 PhigPhack_70 — tRNA PhigPhack_71 — tRNA PhigPhack_72 — tRNA PhigPhack_73 PhigPhack_74 |
Publication Info | |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info | |
Archiving status | Archived |
Pitt Freezer Box# | 204 |
Pitt Freezer Box Grid# | B8 |
Available Files | |
Plaque Picture | Download |