Mycobacterium phage Phoebus
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Detailed Information for Phage Phoebus
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByAlec Schneider
Year Found2017
Location FoundLincoln, NE USA
Finding InstitutionUniversity of Nebraska-Lincoln
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates40.815277 N, 96.69905 W Map
Discovery NotesCapsid diameter: 62.5 nm
Tail length: 210 nm
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 2, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage756
Genome length (bp)114320
Character of genome ends3' Sticky Overhang
Overhang Length4 bases
Overhang SequenceATCC
GC Content60.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterJ
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Nebraska-Lincoln
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes238
Number of tRNAs1
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

Phoebus_1
(HNH endonuclease)

Phoebus_2
(terminase)

Phoebus_3

Phoebus_4
(HNH endonuclease)

Phoebus_5

Phoebus_6

Phoebus_7

Phoebus_8

Phoebus_9

Phoebus_10
(terminase large subunit)

Phoebus_11

Phoebus_12
(portal protein)

Phoebus_13
(capsid maturation protease)

Phoebus_14
(major capsid protein)

Phoebus_15
(glycosyltransferase)

Phoebus_16
(serine/threonine kinase)

Phoebus_17
(methyltransferase)

Phoebus_18
(glycosyltransferase)

Phoebus_19
(glycosyltransferase)

Phoebus_20
(glycosyltransferase)

Phoebus_21

Phoebus_22

Phoebus_23
(glycosyltransferase)

Phoebus_24

Phoebus_25
(head-to-tail adaptor)

Phoebus_26
(head-to-tail stopper)

Phoebus_27

Phoebus_28
(tail terminator)

Phoebus_29

Phoebus_30

Phoebus_31
(major tail protein)

Phoebus_32
(tail assembly chaperone)

Phoebus_33
(tail assembly chaperone)

Phoebus_34
(tape measure protein)

Phoebus_35
(minor tail protein)

Phoebus_36
(minor tail protein)

Phoebus_37
(minor tail protein)

Phoebus_38
(minor tail protein)

Phoebus_39
(minor tail protein)

Phoebus_40

Phoebus_41

Phoebus_42

Phoebus_43

Phoebus_44

Phoebus_45

Phoebus_46
(lysin A)

Phoebus_47

Phoebus_48
(lysin B)

Phoebus_49
(holin)

Phoebus_50

Phoebus_51
(thioredoxin)

Phoebus_52

Phoebus_53

Phoebus_54

Phoebus_55

Phoebus_56

Phoebus_57

Phoebus_58
(Lsr2-like DNA bridging protein)

Phoebus_59

Phoebus_60

Phoebus_61

Phoebus_62

Phoebus_63

Phoebus_64

Phoebus_65

Phoebus_66

Phoebus_67

Phoebus_68

Phoebus_69

Phoebus_70

Phoebus_71

Phoebus_72

Phoebus_73

Phoebus_74

Phoebus_75

Phoebus_76

Phoebus_77

Phoebus_78

Phoebus_79

Phoebus_80

Phoebus_81

Phoebus_82

Phoebus_83

Phoebus_84
(tyrosine integrase)

Phoebus_85

Phoebus_86

Phoebus_87

Phoebus_88

Phoebus_89

Phoebus_90

Phoebus_91

Phoebus_92

Phoebus_93

Phoebus_94

Phoebus_95

Phoebus_96

Phoebus_97

Phoebus_98
(immunity repressor)

Phoebus_99
(helix-turn-helix DNA binding protein)

Phoebus_100

Phoebus_101

Phoebus_102
(esterase)

Phoebus_103

Phoebus_104

Phoebus_105

Phoebus_106

Phoebus_107

Phoebus_108

Phoebus_109

Phoebus_110

Phoebus_111

Phoebus_112

Phoebus_113
(HNH endonuclease)

Phoebus_114

Phoebus_115

Phoebus_116

Phoebus_117

Phoebus_118
(RecB-like exonuclease)

Phoebus_119

Phoebus_120

Phoebus_121

Phoebus_122

Phoebus_123

Phoebus_124
(HNH endonuclease)

Phoebus_125

Phoebus_126

Phoebus_127

Phoebus_128

Phoebus_129
(polynucleotide kinase)

Phoebus_130

Phoebus_131
(endonuclease VII)

Phoebus_132
(WhiB family transcription factor)

Phoebus_133
(helix-turn-helix DNA binding protein)

Phoebus_134

Phoebus_135

Phoebus_136

Phoebus_137
(DNA primase/polymerase)

Phoebus_138

Phoebus_139

Phoebus_140

Phoebus_141

Phoebus_142

Phoebus_143

Phoebus_144
(helix-turn-helix DNA binding protein)

Phoebus_145

Phoebus_146

Phoebus_147

Phoebus_148
(helix-turn-helix DNA binding protein)

Phoebus_149
(HNH endonuclease)

Phoebus_150

Phoebus_151

Phoebus_152

Phoebus_153

Phoebus_154
(HNH endonuclease)

Phoebus_155

Phoebus_156

Phoebus_157

Phoebus_158
(RNA ligase)

Phoebus_159
(ClpP-like protease)

Phoebus_160
(DnaQ-like DNA polymerase III subunit)

Phoebus_161

Phoebus_162

Phoebus_163

Phoebus_164

Phoebus_165
(nucleotide pyrophosphohydrolase)

Phoebus_166

Phoebus_167

Phoebus_168
(helix-turn-helix DNA binding protein)

Phoebus_169

Phoebus_170

Phoebus_171

Phoebus_172

Phoebus_173

Phoebus_174

Phoebus_175

Phoebus_176
(metallophosphoesterase)

Phoebus_177

Phoebus_178

Phoebus_179

Phoebus_180

Phoebus_181

Phoebus_182

Phoebus_183

Phoebus_184 — tRNA

Phoebus_185

Phoebus_186

Phoebus_187
(histidine triad nucleotide binding protein)

Phoebus_188

Phoebus_189

Phoebus_190

Phoebus_191

Phoebus_192

Phoebus_193

Phoebus_194

Phoebus_195

Phoebus_196

Phoebus_197

Phoebus_198

Phoebus_199
(FtsK-like DNA translocase)

Phoebus_200

Phoebus_201

Phoebus_202

Phoebus_203

Phoebus_204
(Ku-like dsDNA break-binding protein)

Phoebus_205

Phoebus_206

Phoebus_207

Phoebus_208

Phoebus_209

Phoebus_210

Phoebus_211

Phoebus_212

Phoebus_213

Phoebus_214

Phoebus_215

Phoebus_216

Phoebus_217

Phoebus_218

Phoebus_219

Phoebus_220

Phoebus_221

Phoebus_222

Phoebus_223

Phoebus_224

Phoebus_225

Phoebus_226

Phoebus_227

Phoebus_228

Phoebus_229

Phoebus_230

Phoebus_231

Phoebus_232

Phoebus_233

Phoebus_234

Phoebus_235

Phoebus_236

Phoebus_237

Phoebus_238

Phoebus_239

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK524529
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 65
Pitt Freezer Box Grid# H4
Available Files
EM PictureDownload
GenBank File for PhameratorDownload