Detailed Information for Phage Rona |
Discovery Information |
Isolation Host | Microbacterium foliorum NRRL B-24224 |
Found By | Alison Arter |
Year Found | 2020 |
Location Found | Greenville, PA United States |
Finding Institution | Thiel College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 27°C |
GPS Coordinates | 41.4141 N, 80.3922 W Map |
Discovery Notes | Was found in behind the home plate of the bullpen from my college softball field. It was a warmer day and slightly damp after rainfall the day prior. |
Naming Notes | I have chosen the name Rona because the phage was found during the COVID-19 pandemic. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Dec 7, 2020 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 914 |
Genome length (bp) | 41584 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | ACTCCCGGCA |
GC Content | 69.7% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | EB |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | Allegany College of Maryland |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 65 |
Number of tRNAs | 1 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | OP434445 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
116 |
Pitt Freezer Box Grid# |
A2 |
Available Files |
GenBank File for Phamerator | Download |