| Detailed Information for Phage Zhafia | |
| Discovery Information | |
| Isolation Host | Microbacterium foliorum NRRL B-24224 |
| Found By | Kira Bifone, Giselle Tevlin |
| Year Found | 2022 |
| Location Found | Spokane, WA United States |
| Finding Institution | Gonzaga University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 22°C |
| GPS Coordinates | 47.668573 N, 117.403505 W Map |
| Discovery Notes | On August 30, 2022, when the soil sample was collected the soil was slightly damp. It was easy to scoop and found surrounded by grass. The weather was warm. |
| Naming Notes | Combination of two friends' names. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Sep 6, 2023 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 112 |
| Genome length (bp) | 62287 |
| Character of genome ends | Direct Terminal Repeat |
| Direct Terminal Repeat Length | 199 bp |
| GC Content | 66.9% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | EG |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
Click to ViewAltheas AluminumJesus BabyDotz BirdInFrench Blab CandC Casend DonaldDuck EverythinBagel Fizzles FrankDeliGuy Fransoyer Fregley Gazebo Grassboy Hyperion Jehoshaphat Judebell Kelcole Kyva Llemily Lonelysoil Marcie Mashley MorillMayhem Namago Nike OneinaGillian Pepe25 Phabia Phinky Quammi RobinRose Romm Rowlf RubyRalph Rudy SadLad SallyK Sillytadpoles Squash Statler StrawberryJamm Teehee Tempo Tissue Viceroy Wayne3 Wheelie Wilca Zagie Zhafia |
| Annotating Institution | Gonzaga University |
| Annotation Status | Being Annotated (Expected completion by 2/1/2025) |
| Plaque Notes | Plaques from the phage Zhafia are small and cloudy around the edges. They range in size from 1 mm to 5mm when grouped in close proximity. |
| Morphotype | Siphoviridae |
| Number of Genes | 113 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewZhafia_1 Zhafia_2 Zhafia_3 Zhafia_4 Zhafia_5 Zhafia_6 Zhafia_7 Zhafia_8 Zhafia_9 Zhafia_10 Zhafia_11 Zhafia_12 Zhafia_13 Zhafia_14 Zhafia_15 Zhafia_16 Zhafia_17 Zhafia_18 Zhafia_19 Zhafia_20 Zhafia_21 Zhafia_22 Zhafia_23 Zhafia_24 Zhafia_25 Zhafia_26 Zhafia_27 Zhafia_28 Zhafia_29 Zhafia_30 Zhafia_31 Zhafia_32 Zhafia_33 Zhafia_34 Zhafia_35 Zhafia_36 Zhafia_37 Zhafia_38 Zhafia_39 Zhafia_40 Zhafia_41 Zhafia_42 Zhafia_43 Zhafia_44 Zhafia_45 Zhafia_46 Zhafia_47 Zhafia_48 Zhafia_49 Zhafia_50 Zhafia_51 Zhafia_52 Zhafia_53 Zhafia_54 Zhafia_55 Zhafia_56 Zhafia_57 Zhafia_58 Zhafia_59 Zhafia_60 Zhafia_61 Zhafia_62 Zhafia_63 Zhafia_64 Zhafia_65 Zhafia_66 Zhafia_67 Zhafia_68 Zhafia_69 Zhafia_70 Zhafia_71 Zhafia_72 Zhafia_73 Zhafia_74 Zhafia_75 Zhafia_76 Zhafia_77 Zhafia_78 Zhafia_79 Zhafia_80 Zhafia_81 Zhafia_82 Zhafia_83 Zhafia_84 Zhafia_85 Zhafia_86 Zhafia_87 Zhafia_88 Zhafia_89 Zhafia_90 Zhafia_91 Zhafia_92 Zhafia_93 Zhafia_94 Zhafia_95 Zhafia_96 Zhafia_97 Zhafia_98 Zhafia_99 Zhafia_100 Zhafia_101 Zhafia_102 Zhafia_103 Zhafia_104 Zhafia_105 Zhafia_106 Zhafia_107 Zhafia_108 Zhafia_109 Zhafia_110 Zhafia_111 Zhafia_112 Zhafia_113 |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 166 |
| Pitt Freezer Box Grid# | B1 |
| Available Files | |
| Plaque Picture | Download |
| EM Picture | Download |