Microbacterium phage Abigail
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Detailed Information for Phage Abigail
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224
Found ByAlly Breen and Tess Flaherty
Year Found2020
Location FoundWorcester, MA Worcester
Finding InstitutionWorcester Polytechnic Institute
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates42.2774 N, 71.8082 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 26, 2021
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage184
Genome length (bp)41003
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceTCTCCCGGCA
GC Content66.5%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEB
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionWorcester Polytechnic Institute
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes68
Number of tRNAs3
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Abigail_1

Abigail_2
(terminase small subunit)

Abigail_3
(terminase large subunit)

Abigail_4
(portal and MuF-like fusion protein)

Abigail_5
(capsid maturation protease)

Abigail_6
(major capsid protein)

Abigail_7

Abigail_8
(head-to-tail adaptor)

Abigail_9
(head-to-tail stopper)

Abigail_10

Abigail_11
(tail terminator)

Abigail_12
(major tail protein)

Abigail_13
(tail assembly chaperone)

Abigail_14
(tail assembly chaperone)

Abigail_15

Abigail_16
(tape measure protein)

Abigail_17
(minor tail protein)

Abigail_18
(minor tail protein)

Abigail_19

Abigail_20
(minor tail protein)

Abigail_21
(minor tail protein)

Abigail_22
(endolysin)

Abigail_23

Abigail_24

Abigail_25

Abigail_26

Abigail_27

Abigail_28
(Cas4 family exonuclease)

Abigail_29

Abigail_30

Abigail_31
(MazG-like nucleotide pyrophosphohydrolase)

Abigail_32
(thymidylate kinase)

Abigail_33
(recombination directionality factor)

Abigail_34

Abigail_35
(glutaredoxin)

Abigail_36
(holliday junction resolvase)

Abigail_37

Abigail_38

Abigail_39

Abigail_40

Abigail_41
(DNA primase)

Abigail_42
(DNA polymerase I)

Abigail_43

Abigail_44

Abigail_45
(DNA binding protein)

Abigail_46

Abigail_47

Abigail_48
(ParB-like nuclease domain protein)

Abigail_49

Abigail_50

Abigail_51
(HNH endonuclease)

Abigail_52

Abigail_53

Abigail_54

Abigail_55

Abigail_56
(dihydrofolate reductase)

Abigail_57

Abigail_58

Abigail_59
(thymidylate synthase)

Abigail_60

Abigail_61

Abigail_62

Abigail_63

Abigail_64

Abigail_65

Abigail_66

Abigail_67 — tRNA
(tRNA-Asn(gtt))

Abigail_68 — tRNA
(tRNA-Gln(ctg))

Abigail_69 — tRNA
(tRNA-Lys(ctt))

Abigail_70
(HNH endonuclease)

Abigail_71

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMZ322012
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 1X10^10
Pitt Freezer Box# 131
Pitt Freezer Box Grid# B2
Available Files
GenBank File for PhameratorDownload