Microbacterium phage Alyxandracam
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Detailed Information for Phage Alyxandracam
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224 SEA
Found ByCameron Kedy, Alyxandra Siemer, and Hari Kotturi
Year Found2018
Location FoundOklahoma City, OK USA
Finding InstitutionUniversity of Central Oklahoma
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates35.51556 N, 97.663611 W Map
Discovery NotesNorth Oklahoma City, reddish-brown clay ground soil.
Naming NotesUnique character name from a show, liked by the discoverers.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMar 18, 2019
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage231
Genome length (bp)41770
Character of genome endsCircularly Permuted
GC Content63.4%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEA
SubclusterEA1
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Central Oklahoma
Annotation StatusIn GenBank
Plaque NotesCloudy plaques, about 1mm diameter / small plaque
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Alyxandracam_1

Alyxandracam_2
(terminase)

Alyxandracam_3
(portal protein)

Alyxandracam_4
(capsid maturation protease)

Alyxandracam_5
(scaffolding protein)

Alyxandracam_6
(major capsid protein)

Alyxandracam_7

Alyxandracam_8

Alyxandracam_9

Alyxandracam_10

Alyxandracam_11

Alyxandracam_12
(tail terminator)

Alyxandracam_13

Alyxandracam_14
(major tail protein)

Alyxandracam_15
(tail assembly chaperone)

Alyxandracam_16
(tail assembly chaperone)

Alyxandracam_17
(tape measure protein)

Alyxandracam_18
(minor tail protein)

Alyxandracam_19
(minor tail protein)

Alyxandracam_20

Alyxandracam_21

Alyxandracam_22

Alyxandracam_23
(minor tail protein)

Alyxandracam_24
(lysin A)

Alyxandracam_25
(membrane protein)

Alyxandracam_26
(holin)

Alyxandracam_27

Alyxandracam_28

Alyxandracam_29

Alyxandracam_30

Alyxandracam_31

Alyxandracam_32
(membrane protein)

Alyxandracam_33
(membrane protein)

Alyxandracam_34
(RecA-like DNA recombinase)

Alyxandracam_35
(nuclease)

Alyxandracam_36

Alyxandracam_37
(AAA-ATPase)

Alyxandracam_38
(Cas4 family exonuclease)

Alyxandracam_39
(DNA polymerase I)

Alyxandracam_40

Alyxandracam_41
(DNA helicase)

Alyxandracam_42
(phosphoesterase)

Alyxandracam_43

Alyxandracam_44

Alyxandracam_45
(MazG-like nucleotide pyrophosphohydrolase)

Alyxandracam_46

Alyxandracam_47
(thymidylate kinase)

Alyxandracam_48
(glycosyltransferase)

Alyxandracam_49

Alyxandracam_50
(membrane protein)

Alyxandracam_51
(thymidylate synthase)

Alyxandracam_52

Alyxandracam_53

Alyxandracam_54

Alyxandracam_55

Alyxandracam_56

Alyxandracam_57

Alyxandracam_58

Alyxandracam_59

Alyxandracam_60

Alyxandracam_61

Alyxandracam_62

Alyxandracam_63

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN062713
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload