Microbacterium phage Clancy
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Detailed Information for Phage Clancy
Discovery Information
Isolation HostMicrobacterium foliorum NRRL B-24224 SEA
Found ByMatthew Johnson
Year Found2018
Location FoundLa Grange, KY USA
Finding InstitutionWestern Kentucky University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates38.395926 N, 85.437872 W Map
Discovery NotesSoil Sample was mud taken from Reformatory Lake in La Grange, Kentucky.
Naming NotesI named the phage after my favorite author, Tom Clancy.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 28, 2019
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1596
Genome length (bp)41555
Character of genome endsCircularly Permuted
GC Content63.4%
Fasta file available?Yes: Download fasta file
Characterization
ClusterEA
SubclusterEA1
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionWestern Kentucky University
Annotation StatusIn GenBank
Plaque NotesThe plaques were very turbid and through isolation got smaller. Tests were performed to make sure the different sized plaques were the same phage.It was very hard to purify to one plaque. Plaques also had large halos surrounding them.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List
Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMK967400
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 4.5x10^9
Pitt Freezer Box# 88
Pitt Freezer Box Grid# E5
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload